Polynucleobacter asymbioticus: Pnuc_0047
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Entry
Pnuc_0047 CDS
T00502
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pnu
Polynucleobacter asymbioticus
Pathway
pnu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pnu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Pnuc_0047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnu03021
]
Pnuc_0047
03400 DNA repair and recombination proteins [BR:
pnu03400
]
Pnuc_0047
Enzymes [BR:
pnu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Pnuc_0047
Transcription machinery [BR:
pnu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Pnuc_0047
DNA repair and recombination proteins [BR:
pnu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Pnuc_0047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Peptidase_M23
Biotin_lipoyl_2
Baculo_ME53
Motif
Other DBs
NCBI-ProteinID:
ABP33269
UniProt:
A4SUV5
LinkDB
All DBs
Position
51573..55835
Genome browser
AA seq
1420 aa
AA seq
DB search
MKALLDLFKQTQGDEQFDVIKIGLASPEKIRSWSFGEVRKPETINYRTFKPERDGLFCAK
IFGPTKDYECLCGKYKRLKFRGVICEKCGVEVTLAKVRRERMGHIELAAPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAYVVVDPGMTPEGAMKRGQIMSEDEYIAKTEEYGDGAF
TAIMGAEGIRDLLRGIDIDREVETIRADLKATGSDAKIKKYAKRLKVLEAFQTSGIKPDW
MIMEVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELRAPEIIVRNEK
RMLQEAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKSGRFRQNLLGKRVDYSGRSVIV
VGPTLKLHQCGLPKLMALELFKPFIFNKLETLGIATTIKAAKKEVESQTPIVWDILEEVI
REHPIMLNRAPTLHRLGIQAFEPMLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEA
QMEARTLMLASNNVLFPANGEPSIVPSQDVVLGLYYATRDKINGKGEGMVFANIAEVIRA
HEAGQVELASRVAVRITEFEIVDKKAEGDARFAEKTKIYQTSVGRAILSEILPKGMTFEE
INKPLKKKEISRLINTSFRKCGLRETVIFADRLLQSGFRLATNAGISVAIDDMLIPTSKE
RIITEATNKVKEYDKQFMSGLVTNQERYNNVVDIWGAAGDQVGKAMMDELSHVDVLDRNS
KTVRQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQ
YFISTHGARKGLADTALKTANSGYLTRRLCDVTQDLVVIEDDCGATSGVTMKALVEGGEI
IEALRDRILGRVCIGDIVHPDTQEVIVANDTLLDEDHVDQIVALGIDEVKVRTVLSCLTR
FGLCAKCYGRDLGRGGLVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRALVASNIE
AKSNGALKFSGTMRIVKNAKGEQIVISRSGEALIIDDNGRERERHKVPYGATLLFKEDAA
VKAGASLATWDPLTRPIISEYAGIARFDNVEEGVTVAKQVDEVTGLSTLVVIDGKRRSAA
SKGVRPMINLVDDKGGEVMIAGTDHPVNIGLQVGALITVKDGQKVEVGEVLARIPIESQK
TRDITGGLPRVAELFEARSPKDAAVLAKVTGTVSFGKETKGKQRLVITDMDGEANEFLIP
KEKQVLVHDGQVVNKGEMIVEGPADPHDILTLRGIEELAIYIVDEVQDVYRLQGVKINDK
HIEVIVRQMLRRVQITDGGDTAYITGEQVERSKLYDANDLVIAAGKRPAQFENVLLGITK
ASLSTDSFISAASFQETTRVLTEAAIMGKTDTLRGLKENVIIGRLIPAGTGLSYRRARKV
REQFERDRAQMIAAEEEAIANTPVEIEAEVIAPAGEADPS
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcattgctcgatttatttaagcaaacgcagggtgatgagcagtttgatgtcatc
aagattggtcttgcatcccctgagaaaattcgctcatggtcttttggtgaagtacgcaaa
ccagaaaccattaactaccggacttttaagcccgagcgtgatggtttgttctgcgccaag
atttttggaccaactaaagactacgagtgcttatgcggcaagtacaagcgcttaaagttc
cgtggcgttatctgcgagaagtgcggcgttgaagttacgctcgccaaggtacgtcgtgag
cgcatgggccacattgagttagctgcccctgtagcgcacatttggttcttgaaatcctta
ccatcccgtttgggtatggttctcgatatgacattgcgtgatatcgagcgcgttctttac
tttgaagcttatgtagtcgttgatcctggcatgactcctgaaggcgcgatgaagcgcggt
cagatcatgtctgaagatgagtacattgccaagactgaagagtatggtgacggtgcattt
actgccatcatgggcgcggaaggtattcgtgacctcttgcgcggtatcgatatcgatcgt
gaagtagagacgattcgtgccgatttgaaagctactggtagcgatgccaagatcaagaaa
tacgctaagcgcttaaaagtgctcgaggcgttccagacttcaggtattaagcctgactgg
atgatcatggaagtgttgccagtattgccaccagagttgcgcccattggtgccattggat
ggcggtcgcttcgctacttccgatttgaacgacctctaccgtcgtgtgatcaaccgtaac
aatcgtttgaagcgtttgttagagttgcgcgcaccagagatcatcgttcgtaacgaaaaa
cgcatgttgcaggaagcggttgactcattgctcgacaacggtcgtcgcggtaaggctatg
actggcgctaacaagcgtccgttgaagtccttggctgagatgattaaaggtaagagcggt
cgtttccgtcaaaacttgttgggtaaacgtgttgactactcaggtcgttcagtcatcgtg
gttggcccgacattgaaattgcatcagtgcggcttaccaaaattgatggccttggaattg
ttcaagccattcattttcaacaagctcgagactttgggaatcgcaactactattaaggct
gcgaagaaagaggttgaaagtcagactccaatcgtttgggacattctcgaagaagtgatt
cgtgaacatccaatcatgttgaaccgtgcgcctacattacaccgtctcggtattcaggct
ttcgagccaatgctgattgaaggtaaggcgatccaattgcacccattagtctgcgcggca
tttaacgccgactttgacggtgaccaaatggcggttcacgttcctttgtcgctcgaagca
caaatggaggcgcgtacattgatgttggcttcgaacaacgtattgttcccagctaacggc
gaaccatctatcgttccttcacaggacgtggtgttaggtctgtactacgctactcgtgac
aagatcaatggtaaaggcgaaggcatggttttcgctaatatcgctgaagtcattcgtgca
catgaagctggccaggttgaattggcttcacgcgttgctgtgcgtattactgagtttgag
attgtggataagaaagcagagggcgatgcccgttttgctgaaaagaccaagatctatcaa
acttcagttggccgtgcaatcttgtcagaaatcttgcctaagggtatgacttttgaggaa
atcaataagcctctgaagaaaaaagaaatctcacgtttgataaacacttcattccgtaag
tgcggtctccgtgaaacagttatttttgctgaccgtctcttgcagtctggtttccgcttg
gcaacaaatgctggtatctcggttgcaatcgacgatatgctgattcctacctctaaagag
cgcatcatcactgaagccactaacaaggttaaagagtatgacaagcagttcatgtcaggt
ctcgtaaccaatcaagagcgttataacaacgtggttgatatttggggcgcagctggcgac
caagttggcaaagcgatgatggatgagttatcgcacgttgacgtactcgaccgtaacagt
aaaactgtgcgtcaagaatcctttaactctatctatatgatggcggattctggtgcacgt
ggatctgcagcgcagattcgtcagttggccggtatgcgtggtttgatggcgaagcctgat
ggctccattattgaaaccccaattactgcgaacttccgtgaaggcttgaacgtattgcag
tacttcatctcaacccacggtgctcgtaaaggtctagccgatacggcattgaagacagcg
aactcaggttacttgacacgtcgtttgtgcgacgtaactcaagacctcgttgtgatcgaa
gatgattgcggtgcaacttcaggcgtaacaatgaaggctctcgtagagggcggcgaaatt
atcgaagcattgcgcgatcgtattttgggtcgtgtatgtatcggtgacatcgttcatcca
gatacacaagaagttattgttgctaacgacacattgctcgacgaggatcacgtagatcaa
atcgttgctttaggcattgatgaagtgaaagttcgcacagtattgtcatgcttaactcgc
tttggtttgtgcgctaagtgctacggacgtgatttaggtcgcggtggtttggtaaacgtt
ggtgaggcagttggcgtgatcgctgctcagtccatcggtgagccaggcacacagttgact
atgcgtaccttccacattggtggtgcggcgtcacgcgctttggttgcaagcaatattgaa
gctaagtctaatggtgcgttgaagttctctggcacgatgcgtattgtcaagaacgcaaaa
ggtgagcagatcgtgatttcacgttctggtgaagctttgatcattgacgataacggccgt
gagcgtgagcgtcataaagtgccttacggcgcaactctcttgttcaaagaagatgctgca
gtcaaggcaggcgcaagcttggcaacatgggatccgttaacacgtccaatcatttctgag
tacgctggtattgctcgcttcgacaacgttgaagaaggcgttactgtagccaagcaggtt
gacgaagtaactggtctctccaccttggtggtgattgatggtaagcgtcgtagtgctgct
agcaaaggcgttcgtccaatgatcaacttagttgatgacaagggcggcgaagtgatgatt
gcgggcacagatcacccggtaaacattggcttgcaagttggcgctttgatcactgttaaa
gatggtcaaaaagttgaagttggtgaagtattagcgcgtattccaatcgaatcacagaag
actcgcgatattaccggtggtttgccacgcgttgcagaattgttcgaagcacgttcacca
aaagatgctgctgtattggcgaaagttaccggtacagtttccttcggcaaagaaaccaaa
ggtaagcagcgcttggttattaccgatatggacggcgaagccaatgaattcttgattcct
aaagagaagcaagttctcgttcatgacggtcaagttgtgaacaagggcgagatgattgtg
gaaggtcctgctgatccacacgatatcttgacactcaggggtattgaagagttagctatc
tacatcgttgacgaagttcaagacgtttaccgtttgcaaggcgtgaagattaacgacaag
cacatcgaagttatcgtgcgtcaaatgttgcgtcgtgtgcaaatcactgatggtggcgat
actgcctacatcactggtgagcaagttgagcgttcaaaactgtatgacgctaacgatttg
gtcattgctgcaggtaagcgcccagctcagtttgagaacgttttattgggcattaccaag
gcatctttgtcgaccgacagcttcatttcagcggcttctttccaagaaaccacccgtgta
ttgaccgaagccgcaattatgggcaagaccgatacactccgtggcctcaaggaaaacgtc
attattggtcgtctgatccctgcgggtactggcttgtcttaccgccgtgcacgcaaggtc
agagagcaattcgagcgtgaccgcgctcagatgattgctgccgaagaggaggcaattgct
aatacgcctgtagaaatagaggctgaagtcattgctcctgctggggaggctgatccaagc
taa
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integrated database retrieval system
