Polynucleobacter asymbioticus: Pnuc_0086
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Entry
Pnuc_0086 CDS
T00502
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pnu
Polynucleobacter asymbioticus
Pathway
pnu00300
Lysine biosynthesis
pnu00470
D-Amino acid metabolism
pnu01100
Metabolic pathways
pnu01110
Biosynthesis of secondary metabolites
pnu01120
Microbial metabolism in diverse environments
pnu01230
Biosynthesis of amino acids
Module
pnu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pnu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Pnuc_0086
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pnuc_0086
Enzymes [BR:
pnu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Pnuc_0086
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ABP33308
UniProt:
A4SUZ4
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All DBs
Position
complement(80034..81332)
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AA seq
432 aa
AA seq
DB search
MISKAIPLPSLTGFSERNGNWYAEDIALADLAREFGTPLYVYSKSALSKAYQAYDKACVD
KQGKRRARIHYAMKANSNLAVINCFKELGAGFDLVSGGELARALAIGADPKSLVFAGVGK
SAKEIAEALKAGVKCINVESIAELHKINRVATELGLRAPISLRVNPDVDAQTHPYISTGL
KGNKFGIAYHEVLKTYREASQLAQIDVVGIDCHIGSQITTTAPYLDALDKVLDLVAQLKK
EGIVIHHLDLGGGLGISYSDETPPDITDFTDTLLNRVAERGFGHLDVVLEPGRSLVGNAG
VLLTTVEYLKPGAEKNFCIVDAAMTELMRPALYEAHHGIVPVQAKQAKALTYDVVGPVCE
SGDWLGRDRHLAVEEGDLLAILSAGAYGFVMASNYNTRPKPAEIIVDGKNAYVIRARENT
SDLFASEAVLPK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgataagtaaagcaattccactcccttcgctaactggctttagtgagcgtaacggcaat
tggtacgccgaggatattgcgctagcagatttagccagagagtttggcactccactttat
gtatatagcaaaagcgctttaagtaaagcctatcaagcgtatgacaaagcatgcgttgat
aaacaaggtaaacgtcgcgcgaggattcattacgcaatgaaagccaatagcaacttagca
gtaattaattgttttaaagaactcggggcaggctttgatttggttagcggtggtgagtta
gcaagagcattagctattggggctgatccaaaaagtttagtgttcgctggcgttggaaaa
tctgccaaagaaattgctgaagccctgaaggctggagtcaaatgcatcaacgtggagtcg
attgctgaactccataaaattaatcgcgttgccactgaacttggactgcgtgcgcccatt
tcattacgtgttaatcccgatgttgatgcgcagacccacccctatatttccacaggctta
aagggtaataaatttggtattgcctatcacgaagtactcaagacttatcgtgaggcatcg
caacttgctcaaattgatgtggttgggattgattgtcatatcggctcacaaattaccacg
acagcgccttacttagatgcgctcgataaagtattagacctagttgctcagcttaagaaa
gagggcatcgttattcatcacctcgatttgggtggtggtctcggcatttcttatagcgat
gaaactccgcctgatatcactgactttacggataccttattaaatcgcgttgctgaacgg
gggtttggccatcttgacgttgtgctagaaccaggccgttccttagtaggaaatgctggc
gtgcttctcaccactgtggaataccttaaacctggtgctgaaaaaaacttttgcattgtt
gatgctgcaatgacggaattgatgcgtccagcgctttacgaggcccaccacggcattgtt
ccagtacaagccaagcaagcaaaagccttaacctacgacgttgtggggcctgtttgtgaa
tcaggcgattggctgggaagagatcgtcaccttgctgttgaagaaggtgatctactggca
attctctcggctggcgcttatggttttgtgatggcatcgaattacaacacgcgcccaaag
ccagcggagatcatagttgacggaaaaaatgcctacgtcattcgtgcacgtgaaaacact
tccgatctatttgctagtgaagcagttttgcctaagtaa
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