Polynucleobacter asymbioticus: Pnuc_0138
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Entry
Pnuc_0138 CDS
T00502
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pnu
Polynucleobacter asymbioticus
Pathway
pnu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pnuc_0138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnu03400
]
Pnuc_0138
Enzymes [BR:
pnu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Pnuc_0138
DNA repair and recombination proteins [BR:
pnu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pnuc_0138
Prokaryotic type
Pnuc_0138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABP33359
UniProt:
A4SV45
LinkDB
All DBs
Position
complement(132189..132983)
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AA seq
264 aa
AA seq
DB search
MPSFSKSDIPEDWRALLGDYFDSPAWKQLELNLQSILDSAPASIYPQPEHFFKALKLTPV
DSVKVVILGQDPYHSPGLAQGLAFSIPADIPLNSRAFPSSLRNISKALALEGFGGLPNGD
LHSWAQQGVLLLNTALSVKPGEAGSHANLGWKSLIDCLITQLALQKPSLVWMLWGGHAQS
KLPLIESGIDQLILQSSHPSGLGVYKTDKPFLEPGAHASCKHFTKANEWLTGHHQAPIQW
ISLNSAVNGIQVDLFSQSGKNTAH
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgccttctttttctaagagcgatattcctgaggattggcgcgcactactaggcgactac
tttgattcacctgcctggaagcaattagaacttaatctgcagtccattctagacagtgcg
cctgcaagcatttacccccagcctgagcatttctttaaagctttaaaactaactccagtc
gattcagtcaaagtagtcatcctcggacaagatccgtatcactcgcccggattggcacaa
ggcttggcattctccattcccgctgatatccctttaaactcccgtgcgtttccaagttca
ttacgcaatatcagcaaggcactcgctcttgaggggtttggtggattgccaaacggtgac
ttacattcatgggcacaacaaggcgtgcttctcctaaatacagcactcagcgtaaaacca
ggcgaagcgggaagtcatgccaatctaggatggaaaagcctgattgattgtttaatcact
cagctcgccttacaaaaaccttctttagtgtggatgctttggggaggtcatgctcaatcc
aagctcccattaattgaatctggtattgaccaactcattttgcaatcttcccacccttct
ggattgggcgtttacaaaaccgacaagccttttttagaacctggtgcacacgctagttgt
aaacacttcaccaaagcaaatgagtggcttactggccatcatcaggcgcccattcaatgg
attagtttaaatagcgcggtaaatggcattcaggtggatttatttagccaaagcggtaaa
aatacagcccactag
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