Polynucleobacter asymbioticus: Pnuc_0199
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Entry
Pnuc_0199 CDS
T00502
Name
(GenBank) NUDIX hydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pnu
Polynucleobacter asymbioticus
Pathway
pnu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pnuc_0199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnu03019
]
Pnuc_0199
Messenger RNA biogenesis [BR:
pnu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Pnuc_0199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
ABP33420
UniProt:
A4SVA6
LinkDB
All DBs
Position
complement(194329..194928)
Genome browser
AA seq
199 aa
AA seq
DB search
MLDREGYRPNVGIVLLNSRNEVFWGKRVGQHSWQFPQGGIQHGESPEQAMYRELHEEVGL
LPEHVQIIGRTRDWLRYDVPEEYLRRQHATRVHRAAYRGQKQIWFLLRLVGLDSDIQLRA
SEHPEFDAWRWVPFWIQLDAVIGFKREVYELALSELARYLSRGVRMHQLAWGSPLDLLQS
FYSKGEEGSPESSKTDKSK
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaccgtgaagggtatagacccaatgtcggcattgtcctccttaacagccgcaac
gaggttttctggggaaaacgcgttgggcagcattcgtggcagttcccgcagggcgggatt
cagcatggcgagagccctgaacaggcgatgtaccgcgaattgcatgaagaggttggcttg
ctgccggaacatgtccagattattggacgaaccagggactggttacgctatgacgtccct
gaggaatatttacgccgtcaacacgccactcgcgttcatcgagccgcctatcggggtcaa
aaacaaatttggttcctcctacgcttagtgggactggatagtgacatccagttgcgagct
tcagagcacccagaatttgatgcttggcgctgggttcctttctggattcaattggatgca
gttattggctttaagcgcgaagtctatgaacttgcactgtcagaactagcgcgttacctt
tcaagaggggtacgcatgcaccaattggcctggggttcgcctttagacttacttcaatct
ttttactcaaaaggcgaagagggctcccccgaatcttccaaaacggataaatcaaaataa
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