Polynucleobacter asymbioticus: Pnuc_0408
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Entry
Pnuc_0408 CDS
T00502
Name
(GenBank) DNA replication and repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pnu
Polynucleobacter asymbioticus
Pathway
pnu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Pnuc_0408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnu03400
]
Pnuc_0408
DNA repair and recombination proteins [BR:
pnu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Pnuc_0408
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Pnuc_0408
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
ABP33628
UniProt:
A4SVW4
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All DBs
Position
399718..400452
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AA seq
244 aa
AA seq
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MASIRVADEPAFVLHSIPYKETSLILDVFTRQHGRMALIAKGAKRPHSVLRPVLQRFQPL
LVSWSGKSELRTLTKSEWVGGMPSLVGDALLCGFYLNELLVKFLAREDDYERLYDRYSET
INALSNLEFESKGLEEILRPFELSLLQETGYAAALDRCVETNDSPVFEALYVYQPERGVR
PIQVDDPGHWPVLRGKSLLAIAAGDFSDPETLSESKQLMRFLLGLHLQDQVLTTRQILID
LKKI
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgattcgtgttgctgacgaacctgcttttgtattgcacagcatcccctataaa
gagactagcttaatcctggatgtctttacacggcagcatggccgcatggccttaattgcc
aagggcgctaaacgtccccattctgtcttacgaccagtattacagcggtttcaaccgtta
ttagtttcatggagtggtaaatcagaattacgtactctgactaaatccgaatgggtaggt
ggcatgccttctctagtcggcgatgctttgctctgtgggttttatctcaatgagctattg
gtcaagtttttggctcgagaagatgattacgaaaggctttacgatcgttactcagaaacg
attaatgctttgtctaatctcgagtttgaatctaaaggtttagaggaaatattacgacct
tttgaactctctttattgcaagagacagggtatgccgctgcattagatcgctgtgttgaa
acaaacgattctcctgtttttgaggccctctatgtttaccaacctgagcgtggtgtgcgc
ccaatacaggttgacgaccccggtcattggccggttttgcgggggaagtcgctcttggcg
attgctgcaggagatttttctgatccagaaactctgtctgagagtaagcaactcatgcgg
tttctattgggactgcacttgcaggatcaagtcttaaccacgcggcaaattttgattgat
ttaaagaaaatctag
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