Polynucleobacter asymbioticus: Pnuc_0500
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Entry
Pnuc_0500 CDS
T00502
Name
(GenBank) SSU ribosomal protein S1P
KO
K02945
small subunit ribosomal protein S1
Organism
pnu
Polynucleobacter asymbioticus
Pathway
pnu03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pnu00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Pnuc_0500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pnu03011
]
Pnuc_0500
Ribosome [BR:
pnu03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Pnuc_0500
Bacteria
Pnuc_0500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
S1_2
PCB_OB
DUF5309
Motif
Other DBs
NCBI-ProteinID:
ABP33720
UniProt:
A4SW56
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All DBs
Position
491964..493637
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AA seq
557 aa
AA seq
DB search
MSESFAELFEESLTRSNMKTGQVISAEVLRIDHNFVVVNAGLKSEAFIPVEEFHNDAGEI
EVAPGDFVSVAIDALENGYGDTILSRDKAKRLASWLNLEKALEQAEIVTGTVTGKVKGGL
TVMVNGIRAFLPGSLVDTRPIKDTSPYEGKTMEFKVIKLDRKRNNVVLSRRAVVEASQGE
ERAKLMSNLKEGAVVTGLVKNITDYGAFVDLGGIDGLLHITDLAWRRVRHPSEMLTVGQE
VTAKILKFDQEKNRVSLGVKQLGDDPWVGIARRYPPNTRLFGKVTNLTDYGAFVEIESGI
EGLVHVSEMDWTNKNVAPSKATALGTEVEVMVLDIDEDKRRISLGIKQCKANPWEEFARS
QQKGDKLSGAIKSITDFGVFIGLPGGIDGLVHLSDLSWNEPGEEAVKKYKKGDEVEATVL
AIDVEKERISLGIKQLSGDPFNNYTSVSDKGSLVTGTVKAVDAKGATIHLADEVEAYLRA
SEISTDRVEDARNVLKEGDSVTAMIINIDRKSRVINLSIKAKDSSDQQDAMSKLQGDAQS
GTTNLGALLKAKLDNQG
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatcatttgcagaattatttgaagaatcattaacccgatcgaatatgaagacc
ggccaagtcatttcggctgaagtccttcgcatcgaccataacttcgtcgttgttaacgct
ggcttaaagtctgaagcgtttattcctgttgaagaattccataacgacgctggcgagatt
gaagtagctcctggcgatttcgtttctgttgctatcgacgctcttgaaaacggctatggc
gacaccatcctctcccgtgataaggctaagcgcctcgcatcatggttgaatttggaaaaa
gctctcgagcaagctgagatcgttactggtactgttaccggtaaggttaaaggcggcttg
actgtgatggttaacggtatccgcgcattcttgcctggatcacttgttgatacacgtcca
atcaaagacaccagcccttacgaaggtaagacgatggagttcaaggttatcaagctcgac
cgtaagcgtaacaacgtagtgttgtcacgtcgcgcagttgttgaagctagccaaggtgaa
gagcgtgctaagttgatgtctaaccttaaagaaggcgcagtggttactggccttgttaag
aacatcacagattacggcgcgttcgttgacctcggtggtatcgatggcctcttgcatatt
accgatttggcatggcgtcgcgtgcgtcacccaagcgagatgttgactgttggtcaagaa
gttacagcaaagatcttgaagttcgatcaagagaaaaaccgtgtttcactcggcgtgaaa
caacttggtgatgatccatgggttggtatcgctcgtcgttaccctccaaatacccgttta
ttcggtaaagtaaccaacttgactgattacggtgcattcgttgaaatcgaatctggtatc
gaaggtttggtacacgtttctgaaatggattggaccaacaagaacgttgctccaagcaaa
gctactgcattaggaaccgaagttgaagtaatggttctggatattgatgaagacaagcgt
cgtattagcttgggcatcaagcagtgcaaagcaaatccatgggaagagtttgcacgttca
cagcaaaaaggcgacaagctttctggtgcgatcaagtctattactgacttcggcgtattc
attggcttgcctggcggtatcgacggtttagttcacctctcagacctttcatggaatgag
ccaggcgaagaagctgttaagaaatacaaaaaaggtgatgaagttgaagccactgtattg
gcaattgatgttgagaaagagcgtatctctctcggtattaagcaattgtctggtgaccca
ttcaacaactacacatctgttagcgacaagggtagcctagtaactggcactgtgaaggct
gttgatgctaagggtgcaactattcacttagctgatgaagttgaagcttacttgcgcgct
tctgagatctcaaccgatcgcgttgaagatgcacgcaatgtattgaaagaaggcgacagc
gttactgccatgatcattaatattgatcgtaagtcacgcgtaatcaatctctcaatcaaa
gcaaaagacagctctgatcaacaagatgcaatgagcaagctccaaggtgatgcgcagtct
ggcacaaccaatttgggtgctttgttgaaagcaaaattggacaatcaaggctaa
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