Polynucleobacter asymbioticus: Pnuc_0699
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Entry
Pnuc_0699 CDS
T00502
Name
(GenBank) Exonuclease, RNase T and DNA polymerase III
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
pnu
Polynucleobacter asymbioticus
Pathway
pnu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Pnuc_0699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnu03400
]
Pnuc_0699
DNA repair and recombination proteins [BR:
pnu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Pnuc_0699
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
QSregVF_b
Motif
Other DBs
NCBI-ProteinID:
ABP33917
UniProt:
A4SWQ3
LinkDB
All DBs
Position
complement(699066..699722)
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AA seq
218 aa
AA seq
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MSQAIIFDVEATDKNNAVIIEAASLDVTSLKPFEVGNPWVQRYNPGKPISLGALATHHIL
DEELVNCPASSSFRLPAGTKYLIGHNIDFDWVAIGSPEVKRICTLALARSLWPDLDSHTQ
SALLYYFERDTARDQLRNAHSALADVWVCSKIVAQIINQLHPISLDALWEMSEKARIPTV
MPYGKHKGELISQVPTDYKQWLLRQDNVSGYLRKALGG
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagccattattttcgatgtagaagccactgataaaaacaatgccgtcatcatc
gaagctgcgtcattagatgtgacctcactcaaaccatttgaagtgggtaacccttgggta
caacgctataaccctggcaagccaatcagcttaggtgctttagctacccaccacatccta
gatgaagagttagtgaattgccctgctagtagttcatttcgattgccggctggaacaaaa
tatctgattggtcacaatattgattttgattgggttgccattggcagccctgaagtaaag
cgtatctgtaccttagcattggcacgcagcctttggcccgatttagatagccatactcaa
agtgcgctgttgtattactttgaaagagatactgctcgagaccaactgcggaacgcccat
agcgctttagcagatgtgtgggtctgctctaagattgttgctcaaattatcaatcaattg
catccaatctccttagatgctttatgggaaatgtctgaaaaggccagaattccaacagtc
atgccttatggaaaacataaaggtgagttgatcagccaagtgccaacagactacaagcag
tggctactacgccaagacaatgtgtctggatatcttcgcaaagctttaggtggttga
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