Polynucleobacter asymbioticus: Pnuc_0883
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Entry
Pnuc_0883 CDS
T00502
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pnu
Polynucleobacter asymbioticus
Pathway
pnu00061
Fatty acid biosynthesis
pnu00071
Fatty acid degradation
pnu01100
Metabolic pathways
pnu01212
Fatty acid metabolism
pnu02024
Quorum sensing
pnu04146
Peroxisome
Module
pnu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pnu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Pnuc_0883
00071 Fatty acid degradation
Pnuc_0883
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Pnuc_0883
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pnuc_0883
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pnu01004
]
Pnuc_0883
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pnu04147
]
Pnuc_0883
Enzymes [BR:
pnu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Pnuc_0883
Lipid biosynthesis proteins [BR:
pnu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Pnuc_0883
Exosome [BR:
pnu04147
]
Exosomal proteins
Exosomal proteins of breast milk
Pnuc_0883
Exosomal proteins of breast cancer cells
Pnuc_0883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABP34099
UniProt:
A4SX85
LinkDB
All DBs
Position
874686..876362
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AA seq
558 aa
AA seq
DB search
MYMNPSRSWHQNYPEGVPSEIGPLSHASVADFLTECFGHFENRKAVEAMGTYFSYRELDR
LSLNFAAYLQTLELEKGARVALMYPNVIEYLVAMIGTLRAGYVVVNINPLYTSRELESQL
LDSGASVLVLMENFAATYEQIAEQVTLKKVLVSSPGELLGLKGVIVNWVARNIKHLIPEW
SFPCIHLKEALKIGSQHQFVQPQIGLNDIAFLQYTGGTTGVSKAAVLLHRNILSNVLQIE
TWLRPGLKHQSHQQLQFLCALPMTHIFALTACALLGISQGALLVLVANPRDIDGFIKLLK
KHPGINIFPGVNTLFHALVHRPEFKQVKLPNLMITIGGGMAVHKTTADHWQALTGVPIAQ
GYGLSETSPVVCVNSPLEKHFTGHIGVPMPSTDIVILDDDEVELPQGTPGEIAIKGPQVM
ACYWNKPEETRHSMTADGYFKSGDIGLITPEGFIQIVDRKKDMIVVAGFKVFPNDVEDVL
TGMPGIRECGVIGAPHRKLGEIVKAYIVKDNHHLSESDVMQYCKEHLTSFKRPRRIIFVH
QLPKSNVGKILRRELRNL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtatatgaatccctctaggtcttggcatcagaactatccagaaggagtaccaagcgag
attggtccgctcagtcatgcttccgtagcagattttctgacagaatgctttgggcatttc
gaaaatcgtaaagcagttgaggcaatgggaacgtacttttcctatcgcgaactggatcgt
ttatcactaaactttgcagcgtatttgcaaactctagaacttgagaagggtgcacgggtt
gcgctcatgtacccaaatgtcattgagtatctggtggccatgattggtaccttgcgcgca
gggtatgtggtcgtcaatatcaacccactttatacctctagagagctggaatctcaactt
ttagatagtggtgcttctgttctagtgttgatggagaactttgcggctacttatgaacaa
attgccgagcaggttactttaaagaaggtgcttgttagtagccccggagagcttttgggt
cttaagggtgtcattgtgaactgggttgcacgcaatattaagcacctcattccagaatgg
agttttccatgcatccacctgaaagaagctttaaagattggcagtcagcatcagtttgtg
caaccccagattggcttaaacgatattgcttttttgcagtacaccggcggtactacgggt
gtctctaaagcggctgtcttattacaccgaaatattctttctaatgtcttacaaattgaa
acgtggcttagacctggcctcaagcatcaaagtcatcaacaattgcagtttctatgtgct
ctgccaatgactcatatttttgcattgacagcatgtgcactgttaggaatttcacaaggc
gctttattggttttggttgcaaatcctcgggacattgatggctttattaagttattaaaa
aaacatccgggaattaatattttccctggcgtgaataccttatttcatgcgcttgtacat
cggccagaatttaaacaagtaaaacttccgaacttaatgatcactattggcggggggatg
gcagttcataaaactaccgctgatcattggcaggctttaactggtgttcctatagctcag
ggctatggattatcggaaacatcgcctgtcgtttgtgtaaatagcccactagaaaagcat
ttcactggccatattggcgtgccgatgccaagtactgacattgtgattttggacgatgat
gaagttgagttaccacaaggcactcctggcgaaatagcaattaaaggccctcaggtcatg
gcctgctattggaataagccagaagagacgcgccactctatgacagccgatggctacttt
aaatcaggtgatataggactcattaccccagaggggttcatacaaattgtcgatcgtaag
aaagacatgatagtagtggcgggatttaaagtatttccgaatgatgtggaggatgtgctt
acaggcatgcctggtattcgagagtgtggcgttattggcgcacctcatcgcaagctaggc
gagattgtgaaagcctatatcgtcaaagacaaccaccacttaagtgagtcggatgtgatg
cagtactgcaaagagcatctcaccagctttaagaggcctagaaggatcatctttgtgcat
caacttcccaagtccaatgttgggaaaatcttacgtcgcgaactaaggaatctctaa
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