Polynucleobacter asymbioticus: Pnuc_0896
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Entry
Pnuc_0896 CDS
T00502
Name
(GenBank) hydroxymethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pnu
Polynucleobacter asymbioticus
Pathway
pnu00730
Thiamine metabolism
pnu01100
Metabolic pathways
pnu01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pnu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Pnuc_0896
Enzymes [BR:
pnu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Pnuc_0896
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ABP34112
UniProt:
A4SX98
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All DBs
Position
complement(886777..888720)
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AA seq
647 aa
AA seq
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MSASNPKNSKNEIPSLKSLERDFGQKFAYPASTKTYLQGSREDIKAPIRMIEQLPTRVGE
ELVANPPVPVYDTSGPYSDPEIVINLEKGLPRLREAWIAERNDTEQLSGPSSEYGVARSK
DEATQELRFAHISAPRVAKSGNNVSQMYYARQGIVTPEMEYVALRESMGLEQLRKDPAYK
QLLKQHPGKSYGANLPDIVTGEFVRQEIAAGRAIIPANINHPELEPMIIGRNFRVKINGN
LGNSAVTSSINEEVEKMVWSIRWGADTIMDLSTGKHIHETREWIIRNSPVPIGTVPIYQA
LDKTGGIAEDLTWEMFRDTLVEQAEQGVDYFTIHAGVLLRYVPLTADRITGIVSRGGSIM
AKWCLAHHKENFLYTKFDEICEIMKAYDVSFSLGDGLRPGCIADSNDAAQFGELHTLGEL
TAKAWKHDVQVMIEGPGHVPMQRIEENMTEELKHCLEAPFYTLGPLITDIAPGYDHITSG
IGAAQIGWYGTAMLCYVTPKEHLGLPDKEDVREGIITYKIAAHGADLAKGLPGAQVRDNA
LSKARFEFRWEDQFNLGLDPERAREYHDATLPAEGAKIAHFCSMCGPKFCSMKITQEVRD
YAATLDADGNPKVPSKVIPIAEVAQEATKGMEEMSAEFRKRGSEIYQ
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaagcaaccctaaaaattctaaaaatgaaatcccaagtcttaaaagcttagag
cgtgattttgggcaaaaatttgcttatccagcatcaaccaaaacatacttacagggatcg
cgtgaagatatcaaagcgccgattcgcatgattgagcaattgccaacgcgcgttggcgaa
gagttggtagcaaacccacctgtacccgtttacgatacttccggtccttacagtgatcct
gagattgtgattaatcttgaaaaaggattgccacgtttacgtgaagcttggattgcagag
cgtaatgacacagagcaactgagtggccctagctctgagtatggtgttgcacgctctaaa
gatgaggcaacacaagagttacgctttgcccacattagcgcaccacgcgtagccaagtcc
ggtaataacgtgagtcaaatgtattacgcccgccaaggaattgttactccagaaatggaa
tacgttgctttgcgtgaatccatgggccttgagcaattacgcaaagatcctgcatacaag
caattactcaagcagcatccaggcaaaagctacggcgctaacttacccgatattgttacc
ggtgagtttgtccgtcaagaaatcgccgctggccgtgccattattcccgccaacatcaat
cacccagagcttgagcccatgattattggtcgtaacttccgcgtgaagattaacggcaac
ctaggtaactctgcagtgacctcctctattaatgaggaagtagagaaaatggtttggtcc
attcgttggggtgctgacacgatcatggacttgtctaccggtaaacatattcatgaaaca
cgcgagtggattattcgcaattctccagttccaattggtactgtaccgatctaccaagcg
ttggataaaaccggtggtattgcagaagacctcacctgggaaatgttccgcgatacattg
gttgagcaagcagagcaaggtgtggactatttcaccattcatgctggtgtcttactgcgc
tacgtacctttaactgcggatcgtattaccggtattgtttctcgcggcggttccattatg
gctaagtggtgcttggcccatcacaaagaaaacttcctctatacaaagtttgatgaaatt
tgcgagatcatgaaagcctatgacgtttcatttagcttaggcgatggtttgcgtcctggc
tgtattgctgattccaatgatgcagcccaatttggcgaattgcatacattaggtgagctt
acagctaaagcctggaaacatgatgttcaagtcatgattgaaggtcctggtcacgttcca
atgcagcgcattgaagagaacatgactgaagagttaaagcattgcctagaagcccccttc
tacactcttggaccattgattaccgacattgccccaggttacgaccacatcaccagcggt
atcggtgcagcgcaaattggttggtatggcacagccatgctttgctatgtcacgccaaaa
gagcatttaggcttgcctgacaaagaagacgtgcgtgaaggcattattacttacaagatt
gctgctcatggtgccgatcttgctaaaggtttgccaggtgcacaggttcgagataacgcc
ctctccaaagcacgttttgaattccgctgggaagatcaatttaatctaggccttgatcct
gagcgcgctcgtgaatatcacgatgccactctacctgctgaaggcgccaaaattgcgcac
ttctgctctatgtgtggacctaaattctgctctatgaaaattactcaagaagtgcgtgac
tatgctgctaccttagatgcggacggcaatccaaaagtaccgtcaaaggtcataccgatt
gcagaagttgctcaagaggcaactaagggcatggaagaaatgtccgcagagttccgtaaa
cgcggcagtgagatttatcagtaa
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