Polynucleobacter asymbioticus: Pnuc_1109
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Entry
Pnuc_1109 CDS
T00502
Name
(GenBank) NAD-dependent formate dehydrogenase catalytic subunit / NAD-dependent formate dehydrogenase iron-sulfur protein
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
pnu
Polynucleobacter asymbioticus
Pathway
pnu00630
Glyoxylate and dicarboxylate metabolism
pnu00680
Methane metabolism
pnu01100
Metabolic pathways
pnu01120
Microbial metabolism in diverse environments
pnu01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pnu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Pnuc_1109
09102 Energy metabolism
00680 Methane metabolism
Pnuc_1109
Enzymes [BR:
pnu01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Pnuc_1109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_7
Fer4_9
Fer2
Fer4_Nqo3
Fer4_10
Fer4_21
Fer4
Fer4_6
Fer4_22
Fer4_8
Fer4_4
Fer4_2
Fer4_16
Fer4_17
Fer4_18
SH3_2
CDC48_N
Motif
Other DBs
NCBI-ProteinID:
ABP34325
UniProt:
A4SXW1
LinkDB
All DBs
Position
complement(1151177..1154068)
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AA seq
963 aa
AA seq
DB search
MNAPTNPKELQLQTVEFKLDGKTIVSYEGETILKAAKRHGIDIPHLCFKDGYRPDGNCRA
CVVEINGERTLAPSCCRTATPGMEVQANSERAVKSQKLVLEMLLSDMPDQGFKWVGDSKA
EEEQHQHGELSTWAARMDVTVRPELKALRRDKVAHDISHPAMAVNLDACIQCNRCVRACR
EEQVNDVIGYAMRGGHSEIVFDLNDPMGESTCVACGECVQACPTGALMPKGLIGSQIVDR
KVDSVCPFCGVGCQITYNVKDEKIVSVEGRDGPANHNRLCVKGRFGMDYIHNPQRLTKPL
IRKPGVPKDESLLERDQDWSEIFREATWEEAIEFAGGGLKKLKDQYGNKVLAGFGSAKGS
NEEAYLFQKLVRTGFGSNNVDHCTRLCHASSVAALLEGVGSGAVSNQVNDVEHSSLIMLI
GSNPTANHPVAATWFKNAAKRGAKIVLCDPRKTEISKHAWRTMQFKPDTDVAMLNAMIYT
IIEEGLVDQEFIKNRSNNFEALKENIKGYSPEAMAPICGIPAETLREVAREFATTKSAMI
LWGMGVSQHVHGTDNARCLIALVSITGQIGKPGSGLHPLRGQNNVQGASDAGLIPMMFPN
YQRVDNPQAHAWFEKFWDTPLDKKPGYTVVEIMHKITAPDSDPDKIRGMYVEGENPAMSD
PDLNHARHALASLEHLVVQDIFMTETALLADVVLPASAWPEKVGTASNTDRMVQMGKKAI
EPPGDAKPDLWIIQEIAKRMGLNWNYQGSDDGVAEVYDEMRQAMHAAINGITWERLEKES
SVTYPCLSLEDPGRPIVFDDEFATTDGKVKLVPADIIPANERPDSEFPFVLITGRQLEHW
HTGSMTRRATVLDAIEPMATVSMNGEDMTQLGVSAGDVITVQSRRGEVGIHVRRDDGTPR
GVIFIPFAYYEAAANLITNSALDPVGKIPEFKYCAVKLAKGGQASKVMGYGTNDPTLNPA
AIV
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcacccacaaatccgaaagaactgcaattgcaaaccgttgaattcaaattagac
ggcaagacgattgtttcttatgaaggtgaaacaattctcaaggcagcaaagcgtcacggt
attgatattccgcatctttgcttcaaagatggttatcgcccagacggaaattgccgtgct
tgtgttgtcgaaattaatggtgagcgcaccttggcgcctagctgctgcagaaccgccact
ccaggcatggaagtgcaagccaatagcgagcgtgctgtaaagagtcaaaagcttgttttg
gagatgttgctctctgatatgccagaccaaggttttaaatgggtgggcgatagcaaggca
gaagaagagcagcatcagcatggtgagctcagcacttgggctgcacgtatggatgtcact
gttcgtcccgagctcaaagcactgcgtagagataaagtcgctcacgatatctctcatcct
gcgatggctgtcaatcttgatgcctgtattcaatgtaaccgctgtgtacgagcttgccgt
gaagagcaggtgaatgatgtgattggttacgcgatgcgtggtggacatagcgaaattgtg
tttgatctaaacgatccaatgggcgagagtacctgtgttgcctgcggtgaatgtgtgcag
gcttgtcctactggcgcattgatgccaaaaggattgattggttcacaaatcgtcgatcgt
aaagtagattctgtttgcccattctgcggagtaggttgtcaaattacctataacgtgaaa
gatgaaaagattgtgagtgttgagggtcgtgatggcccagcgaaccataatcgtttgtgc
gttaaaggtcgctttggcatggattacatccataacccacagcgtttaaccaagccgctg
atacgtaaacctggcgttcctaaagatgaatctttgctcgagcgtgatcaagattggtct
gagatcttccgcgaagcaacatgggaagaggcgattgagtttgctggcggtgggttgaag
aaactcaaagatcagtacggcaataaagtgttagcaggatttggttctgcaaaaggaagt
aacgaagaggcgtatttattccaaaagctagtacgcacaggctttggcagcaataacgta
gaccattgcactcgtctttgccatgcttcatctgtagcagcgcttttagagggtgtgggt
tctggtgctgtaagtaatcaggtaaacgatgttgagcattccagcttaatcatgttgatt
ggatcgaacccaacagccaatcacccggttgctgcaacttggtttaagaatgctgctaag
cgtggcgcaaagattgtgttgtgcgatcctcgtaaaactgaaatcagtaaacatgcttgg
cgcactatgcagttcaagcctgatactgatgtagcgatgctcaatgccatgatctatacg
atcattgaagaaggcttggttgatcaagaatttatcaaaaatcgctctaataactttgag
gcactcaaagaaaatatcaaggggtatagccctgaagcgatggcgccaatctgtggtatc
ccagctgagacactgcgtgaggttgctagagaatttgccactactaaatctgcgatgatt
ttgtggggcatgggcgtgagtcaacacgtgcatggcactgataacgctcgctgcttaatt
gcgctcgtgagtattactggccaaattggtaaaccgggttctggtctacatccattgcgt
ggtcaaaacaatgtgcaaggtgctagtgatgctggtttgattccgatgatgttcccgaac
tatcaaagggttgataacccacaggcgcatgcttggtttgagaaattctgggatacaccg
cttgataaaaagccgggttacaccgtagttgaaatcatgcacaaaatcactgcacctgat
agcgatcccgataagattcgcggcatgtatgttgaaggtgagaaccctgcgatgagtgat
cctgatttgaatcacgcacgacacgctttggcttctttggagcatttggtggtgcaagac
atctttatgactgaaactgctcttctcgcagacgttgtattgcctgcaagcgcttggcca
gaaaaggtgggtactgcaagtaatactgaccgtatggtgcaaatgggtaaaaaagccatt
gaacctcctggagatgcaaagccagatctatggatcattcaggagattgctaaacgcatg
ggcttgaactggaattatcaaggttctgatgatggagttgctgaggtctatgatgaaatg
cgtcaagccatgcatgccgctattaatggtattacttgggagcgcttggaaaaagaatcg
agtgttacttatccatgtttatcgcttgaagatccgggtcgcccaatcgtttttgatgat
gagtttgctactaccgatggaaaagtgaagttggttcctgcggatatcatccccgcaaat
gaacgtcctgattctgaattcccgtttgtcctgattactggtcgtcaacttgagcattgg
catactggaagcatgactcgtcgcgcaacagtgctcgatgctattgagcctatggccact
gtatcgatgaatggtgaagatatgactcagctaggtgtgtctgctggagatgtcattacc
gttcagtctcgtcgcggtgaggtaggtattcatgtacgtcgagatgacggtacaccacgt
ggtgtgatctttattccgtttgcatactatgaggctgctgctaacctcattacgaattct
gcgctagatccggttggcaagattccagaatttaagtattgcgcggtcaagttggctaaa
ggtggtcaagcgtccaaagtaatgggatatggcactaacgatccaacactcaatccggcg
gctattgtctaa
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