Polynucleobacter asymbioticus: Pnuc_1230
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Entry
Pnuc_1230 CDS
T00502
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pnu
Polynucleobacter asymbioticus
Brite
KEGG Orthology (KO) [BR:
pnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pnu03009
]
Pnuc_1230
Enzymes [BR:
pnu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Pnuc_1230
Ribosome biogenesis [BR:
pnu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Pnuc_1230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ABP34445
UniProt:
A4SY81
LinkDB
All DBs
Position
complement(1292072..1293835)
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AA seq
587 aa
AA seq
DB search
MTSSNENDSSPVVNPSATPSHADTTPSNSDGAKTEGGERGERRPRRQGAGGSKHPFNKKR
PFNKDRPRREGGEGNGPREGGHNQGNNQSSKLVPNPAESEALFASVVSGEFDAALDAPEV
EEVKNLDGVNENEISHQTGAERRAQRVRHDEDADMPSDDEMSSLQFANVDDLPLSLRDEV
WSDLDGLDDDADDEDTVKLHKVLADVGMGSRRDMEDLIIQGRVSVNGLPAHIGQRIGPTD
QVRINGKPVHRKIQTKPPRVIMYHKPAGEIVSQSDPEGRPTVFDRLPKPRQGRWIAVGRL
DFNTEGLLLFTTSGELANRLMHPRYGVEREYAVRILGDLSQENTALLKSGITLDDGQAKF
LRLAMGGGEGANRWYHVALSEGRNREVRRMFEAVGHTVSRLIRTRYGIFLLPPRLRRGKW
EEIEAGGIYNLMKSAGLKMPQPSDKGRSPNPNNRDRRPAGEDFQPDPMQTSVSYWGSRDA
LTLASGHNGLTHQSRGGKPGGGGAASEGRGPFRGRTQGGRPGQGAGQGGQGGQGQNRNKA
KKVHHGQSAFVTGNPQTPGNGPKRSAPKGRKPFNKGPRKPRNPGESF
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgacaagctccaacgaaaacgattcatccccggtagtaaatccatcggcaaccccatcc
cacgcggacacaacaccatcaaattctgatggtgccaagaccgaaggtggagagcgtggc
gaacgtcgcccccgtcgccaaggcgcgggaggcagtaaacacccgttcaataaaaagcgc
ccctttaacaaggatcggccacgtcgtgagggcggtgaaggtaatggtccacgcgaaggc
ggtcataaccagggcaataaccaatcctccaaattagtccccaacccggctgagagtgaa
gccttatttgcttcagtggtgtccggtgaattcgatgccgctttagatgctcctgaggtt
gaggaagtaaagaatcttgatggtgtgaatgagaatgaaatctctcatcagactggtgct
gagcgtcgtgcgcaacgcgtgcgtcacgatgaagatgctgatatgccaagtgatgacgag
atgagtagcttgcaatttgcaaacgtcgatgatcttccgctgagtttgcgtgatgaagta
tggtcagacctcgatggtttggatgatgatgctgacgatgaagatactgttaagttacat
aaggttttagcggatgtaggcatgggatcacgtcgcgatatggaagacttgattattcaa
ggacgcgtatcagtcaacggattgccagcgcatattggccaacgcattggaccaacagat
caagtgcgtattaatggcaagccagtacatcgcaagattcagactaagccgccgcgcgtg
attatgtatcacaagcctgctggcgaaatcgtcagccaatcagatccagaaggtcgtcca
actgtatttgatcgtttgccaaagccacgtcaaggccgttggatcgcagtaggtcgcttg
gactttaataccgaaggtttgttgctgttcaccacctctggtgagttggccaatcgtttg
atgcatccgcgatatggtgttgagcgtgaatacgctgtgcgcattctgggtgacttgagt
caagaaaacacagcactattaaagagcggtattacgctcgatgatggccaggctaaattc
ctgcgtctagccatgggtggtggtgagggcgctaaccgctggtaccacgttgcattaagc
gaaggccgtaatcgcgaagtgcgtcgtatgtttgaagccgttggtcatacagtatctcgt
ttaatccgaactcgttatggcattttcttattgcctccacgtttacgtcgtggcaaatgg
gaagagattgaggctggcggcatttacaacttgatgaagtctgcaggcctaaaaatgcca
caaccgtcagacaagggtcgtagccccaatccaaataatcgtgatcgtcgccccgcaggt
gaggatttccagccggatccaatgcaaacctcagtttcttactggggttcgcgtgacgcc
ttaacccttgctagcggccataacggtctcacgcatcaaagcaggggcggtaaaccaggt
ggcggcggtgctgctagcgaagggcgcggtcctttccggggccgtactcagggtggcagg
ccaggacaaggtgctggccaaggcggtcagggtggccaaggtcaaaatcgcaataaggcc
aaaaaggtgcatcatggccagtctgcttttgtgactggaaaccctcaaacaccgggtaat
ggccctaaacgaagcgcccccaaagggagaaaacccttcaataaaggccctagaaagccc
cgtaatcctggcgaaagcttctga
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