Polynucleobacter asymbioticus: Pnuc_1459
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Entry
Pnuc_1459 CDS
T00502
Name
(GenBank) succinyldiaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pnu
Polynucleobacter asymbioticus
Pathway
pnu00300
Lysine biosynthesis
pnu01100
Metabolic pathways
pnu01120
Microbial metabolism in diverse environments
pnu01230
Biosynthesis of amino acids
Module
pnu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pnu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Pnuc_1459
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pnu01002
]
Pnuc_1459
Enzymes [BR:
pnu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Pnuc_1459
Peptidases and inhibitors [BR:
pnu01002
]
Metallo peptidases
Family M20
Pnuc_1459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ABP34673
UniProt:
A4SYV9
LinkDB
All DBs
Position
1534290..1535441
Genome browser
AA seq
383 aa
AA seq
DB search
MSATLELTEALIACHSVTPADGGCQDLIAKRLQAIGFHTESVVSGPENFQVTNLWAIKKG
KAGDQGKVLMFAGHTDVVPTGPLEKWTSDPFTPTIRDGMLYGRGAADMKTSLAAFVVATE
EFVTMHPDHQGAIAFLITSDEEGPANDGTVIMCERLQKHQQRLDYCVIGEPTSVDQLGDM
IKNGRRGSLSGKLKIKGIQAHIAYPHLGKNPIHLSAPAITALVETEWDKGNEYFQPTSFQ
MSNIHAGTGANNVIPGELTIDFNFRFSTESKPEQLRERLESILKNAGLDFEINWVLGGSP
FITGDGDLAGALRKAIKTETQIDTELSTTGGTSDGRFIAKICKEVVEFGPLNVTSHKIDE
CVIVDDVVPLKNIYRKTLEQLIA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccactctcgagctaactgaagctctcattgcttgccattctgtaacgccagcc
gatggtggctgccaagatttaattgccaaaagactacaagcgattggctttcatacagag
agcgttgtgagtggaccagaaaattttcaagtcaccaacttatgggcaatcaaaaaaggc
aaagccggcgatcaaggcaaagtcttgatgtttgccggtcatactgacgtggtgcctact
ggccctttagaaaagtggaccagcgatccctttacgccaactattcgcgatggcatgctt
tatggtcgcggcgcggctgatatgaaaacttctttagcggcgtttgtggtggctactgaa
gaatttgtaactatgcatccagatcatcaaggtgcaattgctttcttgattactagtgat
gaagaaggtcctgcgaacgatggcacagtcatcatgtgtgagcgcttacaaaagcaccag
caacgcttggactactgcgtaatcggcgagccgacatcagttgatcaactgggcgacatg
ataaaaaatggtcgtcgcggatcactctcgggcaagttaaaaattaagggtattcaagcg
catatcgcttacccgcacttaggcaagaaccccattcatctctccgcaccggcaattact
gccttagtagaaactgagtgggacaaaggcaatgaatattttcagcctaccagttttcag
atgtcaaatattcacgctggtacaggtgcgaataacgtgattcctggtgaattgacgatt
gatttcaacttccgcttctctactgaaagtaagccagagcaattacgcgaacgtcttgaa
tctattctcaagaatgccggtctcgattttgaaattaactgggtattaggtggcagccca
ttcatcacaggtgatggtgatttggctggcgcattgcgcaaggctattaagaccgaaacc
cagatcgataccgagctttctactactggcggcaccagcgatggtcgctttatcgccaag
atttgcaaagaagttgtggaatttggccccctcaatgtaaccagtcacaaaattgatgag
tgcgtcattgtggatgacgtagttccacttaaaaatatctatcgcaagacacttgagcaa
ttgattgcttaa
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