Polynucleobacter asymbioticus: Pnuc_1647
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Entry
Pnuc_1647 CDS
T00502
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pnu
Polynucleobacter asymbioticus
Pathway
pnu03030
DNA replication
pnu03430
Mismatch repair
pnu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pnuc_1647
03430 Mismatch repair
Pnuc_1647
03440 Homologous recombination
Pnuc_1647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnu03032
]
Pnuc_1647
03400 DNA repair and recombination proteins [BR:
pnu03400
]
Pnuc_1647
Enzymes [BR:
pnu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pnuc_1647
DNA replication proteins [BR:
pnu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pnuc_1647
DNA repair and recombination proteins [BR:
pnu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pnuc_1647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
RNase_H_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ABP34860
UniProt:
A4SZE6
LinkDB
All DBs
Position
complement(1712017..1713417)
Genome browser
AA seq
466 aa
AA seq
DB search
MDINEVSYPDLAFVDIETTGSHFDRDRITEIGIKTLANDGIQVWERLINPQTFIPQNIQR
LTGISPQMVEGQPSFDQVAKELKQELEGKIFVAHNARFDYGFIKASFKRVGIDFKPKVLC
TVKLSRLLFPEQPRHNLDTIINAHGLQVSARHRALGDADLLLQFWRVCEAKFGAEKLNEV
INQLIGNPSLPPNIDRDLIDSIPDTPGCYIFYGDNKTPLYIGKSISLRNRVMGHFQGALT
QRKEMKLSLQIRDIDWIETSGELGALILESRLIKERMPSMNIKLRRSKDLCGWSLVEDES
GVLLPQLVTHHQLAPGLQENLYGLFYSKREAHSYLKAIAKKHHLCEALLGLEKRVEGKSC
FGYQVKQCGGACLNLTPITLHNLQLKTVLELFKIQVWPYSGPIAIKEGGEMIVIDKWCYL
GTAINQDELYELAESGDAEFDLDIYKIVKKALSGAYKQQVIHFSAQ
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
gtggatattaatgaggtctcgtacccggatttagcttttgtagacatagaaactactggg
tctcattttgatcgggatcgcattacagaaattggcatcaaaacactagctaacgatgga
attcaggtgtgggaacggttaattaatccccaaacctttattccgcaaaatatccaaaga
cttaccggcatctctccacaaatggtggaaggtcaaccaagctttgatcaggttgcgaaa
gagttaaaacaagagcttgagggaaaaatattcgttgctcacaatgctcgatttgattac
gggtttatcaaggcctcttttaaaagggtcggcatcgatttcaagccgaaagtgttatgt
acggtaaagctttctagattgctatttccagagcagcctcgccataatctagataccatc
attaacgcccatggtcttcaggttagcgcccgccatcgtgcgctgggcgatgcagattta
ctgctgcagttttggcgtgtttgtgaagccaagtttggggcagaaaagctcaatgaggtg
atcaatcaactgattggtaatcctagtctaccgccgaatatagatagagacttaatagac
tccatcccagatactcctggttgttatatcttttacggcgataacaagacgccactctat
atcggcaagagtatttctttgcgtaatagggtcatggggcattttcaaggcgcattaaca
cagcgtaaagaaatgaagctctctctgcaaattcgagatattgattggatcgaaaccagt
ggcgagcttggtgccctcattcttgagtctaggttgattaaagaacgtatgcctagtatg
aacattaagctacgaaggtctaaagatctttgtggttggagcttagttgaagatgagtcg
ggagttcttttgccgcaactagtgacccaccatcaactagctcccggtttgcaagagaat
ttatatggcttgttttatagcaaacgagaggcgcactcttatttaaaggcaatagctaaa
aagcatcatctttgcgaggcattgcttggcctagagaagagggtcgagggtaaatcatgc
tttggttatcaggtaaagcaatgtggtggtgcgtgtcttaaccttaccccaattactttg
cataatttgcaattaaagacggtattagagctctttaaaatacaggtatggccttattct
ggaccgatcgcaattaaagagggtggcgagatgattgtgattgataaatggtgttatcta
ggtaccgccattaatcaagatgagctgtatgagctggctgaatctggtgatgctgagttt
gatctggatatttacaagatagttaaaaaagccttatcaggcgcctataagcaacaagtg
attcatttctcagctcaataa
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