Polynucleobacter asymbioticus: Pnuc_1711
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Entry
Pnuc_1711 CDS
T00502
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pnu
Polynucleobacter asymbioticus
Pathway
pnu03030
DNA replication
pnu03410
Base excision repair
pnu03420
Nucleotide excision repair
pnu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pnuc_1711
03410 Base excision repair
Pnuc_1711
03420 Nucleotide excision repair
Pnuc_1711
03440 Homologous recombination
Pnuc_1711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnu03032
]
Pnuc_1711
03400 DNA repair and recombination proteins [BR:
pnu03400
]
Pnuc_1711
Enzymes [BR:
pnu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pnuc_1711
DNA replication proteins [BR:
pnu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Pnuc_1711
DNA repair and recombination proteins [BR:
pnu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Pnuc_1711
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pnuc_1711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ABP34924
UniProt:
A4SZL0
LinkDB
All DBs
Position
complement(1777339..1780170)
Genome browser
AA seq
943 aa
AA seq
DB search
MTKHRLLLVDGSSYLYRAFHAMPDLRNGAGEPTGAIYGMVNMMRRARSELKADHIACVFD
AKGKTFRDEMYSEYKAHRSPMPEDLVKQIEPIHAMVKAMGWPVLMVSGVEADDVIGTLAC
QATEAGWETIISTGDKDLAQLVNPSVTLINTMTNEKLDIEGVIEKFGVPPELIVDYLSII
GDTVDNVPGVPKAGPKTANKWLAEFGNLDNLMANADQVKGVVGENLRASLTWLPQARQLI
TVKTDCDLSPHLPGLDDLHEKSEDAALLRELFERYAFKTWLRDVEKQLNNPSDGGSGAAV
TFDLAGSPITNSSSETDSGELKRVIATAPTKGLTQQTSDLQDAIERHYECVVDEESLERW
MKKIEAAELTAVDTETTSLDALAAELVGISLSVKPGEACYIPVAHRNGEAQLSRELVLKR
MKSWLESSSHLKVGQNLKYDIHIFANYDIHLEGIAFDTLLESYVLESHLPHNMDSLAERH
LGLKTIRYEEVCGKGVHQIGFDQVDLQIATNYAAEDADITLRLHLELWPQIQASPGLLYV
YEKIEMPAMLVLGIMERNGIRIDSALLAKQGQQVGKRLLELEGEIHRLAGQPFNIQSPKQ
IAEILFGQLELPIVKKTPSGAPSTDEEVLQKLAEDYPLPARILDYRSLAKLMSTYIEKLP
RMADPKTGRIHTNFSQATAVTGRLASSDPNLQNIPVRTEEGRRIREAFIPADGCKLLSAD
YSQIELRIMAHIAEDENLLTAFKEGKDVHQATAAEIFGIPLDDVNSEQRRYAKVINFGLI
YGMSAFGLAGNLGIERAAAQNYIAKYFDRYPGVAQYMERTRLEARENGYVETVFGRRLWL
PEIKGSNGPRRQGAERAAINAPMQGTAADLIKLAMIAVEDWLEKEQLKTKMLLQVHDELV
FDVPLDEIDLLQAKLPDLMCHVAQLKVPLVVSIGIGDNWEEAH
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgactaaacatagactcttgttggtagacggctctagctacctatatcgcgccttccac
gctatgccagacctcagaaatggggcgggcgagcctactggggctatatatggcatggtc
aatatgatgcgccgggctcgatctgagctcaaggctgaccatatagcctgcgtctttgat
gccaaagggaagacttttcgggatgaaatgtactctgaatacaaggctcaccgctcccca
atgcctgaagacttggtcaagcaaattgagccgattcatgcgatggtcaaagcaatgggt
tggcctgtactcatggtttcgggtgtagaggcggatgacgtcattggaactttagcttgc
caagcaaccgaagcaggttgggaaaccatcatctctactggtgataaagatttagcgcaa
ttggtaaatccttcggtcactctcatcaatacgatgactaatgagaaattagacatcgaa
ggcgtgattgaaaaatttggcgttccaccagaattgattgtcgattatttatccatcatt
ggggacactgttgataacgttcctggcgtgccaaaggctggaccaaaaactgctaataaa
tggttagcagaatttggtaacttagataacttgatggccaatgcggatcaagttaaaggc
gttgttggtgaaaacttgcgtgctagtttgacttggcttcctcaggcgcgtcaattaatt
actgtaaaaacagattgtgatttatcaccccatttaccgggccttgatgatttacatgaa
aagtcagaggatgccgctttgttgcgtgaactatttgagcgctatgcatttaagacttgg
ttgcgtgatgtcgaaaagcagctcaataacccatctgatgggggttctggggctgcagtc
acttttgatttggctggctcacccattaccaattccagctctgaaactgattctggagag
cttaaaagagtcatcgctacagcacctactaaagggctaacgcagcagactagtgatttg
caagatgcgattgaacgtcactatgaatgtgtagttgacgaagaatctcttgagcgttgg
atgaagaaaattgaagctgctgagttgacggcagtcgataccgagaccacgagcttagat
gcattagcagcagaattagtggggatctctttatcagtaaagccaggtgaggcttgttac
attccagtggcacatcgcaatggtgaagcacagctcagtcgcgagctggttctgaaacgc
atgaagtcttggttagaaagttctagccacctcaaggtcggtcaaaacttaaaatacgac
atccatatatttgcaaattacgatattcatctagagggaattgcattcgacactttgctt
gaatcctatgtgttggaatcgcatttacctcacaatatggatagtttggcagagcgccac
cttggtcttaaaacgattcgctatgaagaggtatgcggcaaaggggttcaccaaattggc
tttgatcaggtggatctgcaaattgctaccaactatgccgccgaagacgcagacatcact
ttgcgcttgcatttagagctctggcctcagattcaggcgagcccaggcctgctctatgtc
tatgaaaagattgaaatgccagcaatgttggtgctgggaatcatggagcgcaacggtatc
cggatcgattccgccttattggctaagcaaggccaacaggtgggtaaacgccttttagag
ctcgagggcgaaattcaccggctggcaggccaaccttttaatattcagtccccaaagcaa
atcgcagaaattttgtttggacaactggaattgcctatagttaaaaagacaccttcgggc
gcaccttctactgatgaagaggttttgcagaagttggcggaagactatccattgcccgcc
cgcattttggactatcgcagtttggccaagttgatgtcgacctatattgaaaaacttccc
cgaatggctgaccctaaaacggggcgaattcacactaacttttctcaggcaactgcagtt
actgggcgcttggcatcaagtgatcctaatttgcaaaatattccggtgcgcactgaagag
ggccgtcgcattcgcgaggcatttattccggctgacggttgcaagttattgtcagccgac
tactcgcagattgagctgcgcatcatggcgcatattgccgaagatgaaaatttattaact
gccttcaaagaaggcaaagacgtccaccaggcaacggctgccgagatattcggaatcccc
ttggatgatgtcaattctgagcaacgtcgttatgccaaggtgattaacttcggtctgatc
tatggcatgagtgcgtttggtttagcgggtaacttaggtattgagcgcgcagcagcgcaa
aactatatcgccaagtactttgaccgatatccgggcgtagctcaatacatggaacggacg
cgtctcgaggctagagaaaacggttatgtagaaacagtctttgggcgacgtctttggttg
cccgaaattaagggctctaacggcccacgccgtcaaggtgctgagcgtgccgcgattaat
gcaccgatgcaaggaactgcggctgatttgattaagctggcgatgatcgcagttgaggat
tggttggaaaaagagcagttgaaaaccaaaatgctgcttcaggttcatgatgaattggta
ttcgatgtgcctttagatgagattgatctgttgcaggctaaattacctgacctcatgtgc
catgtcgcgcagttaaaagtgcccttggtggttagtattggtattggcgataattgggaa
gaggcgcattaa
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