Polynucleobacter asymbioticus: Pnuc_1805
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Entry
Pnuc_1805 CDS
T00502
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pnu
Polynucleobacter asymbioticus
Pathway
pnu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pnuc_1805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnu03019
]
Pnuc_1805
03110 Chaperones and folding catalysts [BR:
pnu03110
]
Pnuc_1805
03029 Mitochondrial biogenesis [BR:
pnu03029
]
Pnuc_1805
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pnu04147
]
Pnuc_1805
Enzymes [BR:
pnu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Pnuc_1805
Messenger RNA biogenesis [BR:
pnu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Pnuc_1805
Chaperones and folding catalysts [BR:
pnu03110
]
Heat shock proteins
HSP60 / Chaperonin
Pnuc_1805
Mitochondrial biogenesis [BR:
pnu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Pnuc_1805
Exosome [BR:
pnu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Pnuc_1805
Exosomal proteins of other body fluids (saliva and urine)
Pnuc_1805
Exosomal proteins of breast cancer cells
Pnuc_1805
Exosomal proteins of colorectal cancer cells
Pnuc_1805
Exosomal proteins of bladder cancer cells
Pnuc_1805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABP35018
UniProt:
A4SZV4
LinkDB
All DBs
Position
complement(1883492..1885144)
Genome browser
AA seq
550 aa
AA seq
DB search
MAAKDVVFGDSARTKMVEGVNILANAVKTTLGPKGRNVVIERSFGGPTITKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTADIAGDGTTTATVLAQSIVREGMKYVVSGHNPMDLKRGI
DKAVTAAIAELAKISKPCTTTKEIAQVGSISANSDHSIGQRIAEAMEKVGKEGVITVEDG
KSLEDELEVVEGMQFDRGYLSPYFINQPEKQVAVLESPYVLLFDKKIANIRDLLPVLEQV
AKSGRPLLIIAEDVEGEALATLVVNNIRGIIKTCAVKAPGFGDRRKAMLEDIAILTGGTV
IAEEIGLTLEKATLEHLGQAKRIEVGKENTIIIDGAGDAKAIEARVKNIRVQIEEATSDY
DKEKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVDDALHATRAAVEEGIVPGGGVALI
RAMQGIKGLKGDNADQDAGISIVLRAMQEPLRTIVSNAGEDAGVVVNAVQASTGNNGYNA
ATGEYGDLVAQGVIDPTKVTKTALVNAASVAGLLLTTDCAISEAPKDESGAGGMPDMGGM
GGMGGMGGMM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgttgtatttggagatagcgctcgcaccaagatggtggaaggcgta
aacattcttgctaatgcagttaaaacaactttaggaccaaaaggtcgcaatgttgtgatc
gagcgttcattcggcggccctaccatcactaaagacggtgtgtccgttgcaaaagaaatc
gaacttaaagacaagctgcaaaacatgggcgcgcagatggttaaggaagttgcttccaaa
actgctgacatcgctggcgacggcacaactaccgctacggttttggctcagtctatcgtt
cgtgaaggcatgaagtatgtagtttcaggccataacccaatggacttgaagcgtggtatc
gataaagctgttacagctgcaatcgcagagctcgcaaaaattagcaagccttgcacgacc
actaaagaaattgctcaggtaggttctatctctgcaaacagcgatcatagtattggtcag
cgcattgcagaagcaatggaaaaagtaggtaaagaaggcgttatcactgttgaagatggt
aagtctttagaggacgagctcgaagtcgttgaaggtatgcagtttgatcgtggctacctt
tctccatacttcatcaatcaaccagaaaagcaagttgctgtattggaaagcccatacgtt
ctcttgtttgataagaagattgctaacatccgtgatttgttaccagtactcgagcaagta
gcaaagtctggccgtcctttgttgatcattgctgaagatgttgaaggcgaagccttagca
actttggttgtaaacaacattcgcggcattatcaagacttgtgctgttaaggctccagga
tttggtgatcgtcgtaaagccatgttggaagacatcgctatcttgactggcggaactgtt
atcgctgaagaaatcggcctgacactcgagaaagcaactcttgagcacttgggtcaagca
aagcgtatcgaagtaggcaaagaaaataccatcatcattgatggtgctggcgatgctaaa
gcgattgaagctcgcgtgaagaacattcgtgttcagatcgaagaagcgactagcgattac
gacaaggaaaaattgcaagagcgtgtagctaaattagctggcggtgttgcggtgattcgt
gttggcgctgctactgaagttgaaatgaaagagaagaaagctcgcgttgatgatgcattg
catgcaactcgtgctgccgtggaagaaggtattgttcctggcggtggcgtagcattgatt
cgtgctatgcaaggtatcaagggattgaaaggcgataacgctgatcaagacgctggtatc
agcatcgtattgcgcgctatgcaagagccattacgtactatcgttagcaacgccggtgaa
gatgctggtgtagttgttaatgcggtacaagcaagcacaggcaataacggttacaacgct
gctactggtgagtatggcgacttggttgctcaaggtgttattgatcctactaaggtaaca
aaaactgcattggtaaatgctgcttctgttgctggcctcttgttgactactgactgcgca
atctccgaggcaccaaaagatgagtctggtgctggtggaatgcctgatatgggtggtatg
ggcggtatgggtggtatgggcggcatgatgtaa
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