Polynucleobacter asymbioticus: Pnuc_1929
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Entry
Pnuc_1929 CDS
T00502
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pnu
Polynucleobacter asymbioticus
Brite
KEGG Orthology (KO) [BR:
pnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnu03021
]
Pnuc_1929
Transcription machinery [BR:
pnu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pnuc_1929
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Asp_decarbox
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
ABP35141
UniProt:
A4T077
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All DBs
Position
2006825..2007754
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AA seq
309 aa
AA seq
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MVQKKFDKPTMQRLPVAQAATASAFPMLPTLGVGTLDSYIAYVNRVPMLSAAEELHLAQE
FRRTENVDAAKTLVLSHLRLVVSVARQYLGYGIPHADLIQEGNIGLMKAVKRYDPNNGAR
LVSYAIHWIKAEIHEYILKNWRLVKTATTKAQRKLFFNLRSNKPTLSALTPSEVDALAKA
LDVKGSDVKEMEMRLAGGDIALEGDDSDDESAYAPIQWLADNTQEPTARIASAEADALQG
PRLDQALMSLDERSRNIVQSRWLAMDAEGNGTKTLHDLAAEYGISAERVRQIETAALKKM
RGLLEAQAA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggtacaaaagaaattcgacaaaccgactatgcaaaggctgcctgtagcgcaggctgcg
acggcgtctgcatttccaatgttgccgactcttggggttggcactctcgactcatacatt
gcatacgttaatcgcgtaccaatgctcagcgctgcggaagaattacatcttgcgcaggag
tttcgtcgcactgaaaatgtagatgcagcgaagacattggtgctttcgcatctccgtctc
gttgtttcagttgcgcgtcaatatcttggctatggcattcctcatgccgacttaattcaa
gaaggcaatatcggcctaatgaaagcagtcaaacgctacgacccaaataatggtgcacga
cttgtttcttacgcgattcattggatcaaagcagaaattcatgagtacattctcaaaaat
tggcgcctagtaaagacagcaaccaccaaagcacaacgcaaattgttctttaacttacgt
agcaataagccaaccttgagcgcacttactcctagcgaggtagatgcactagctaaggca
ttggatgtcaaaggctcggatgttaaagaaatggaaatgcggcttgctggtggagacatt
gcattagagggcgatgacagcgatgatgaatccgcgtatgcgcccattcaatggctagct
gataacactcaagagcccacagcgcgcattgccagcgcagaggcggatgctctacaaggc
cctagattggatcaagccttgatgtctctagacgagcgtagtcgcaacattgtgcaatct
cgctggttagccatggatgctgaaggtaacggaacaaaaacacttcatgatttagccgca
gaatatggcatttcagcagaacgtgtgcgccaaattgagacagccgctcttaaaaagatg
cgcggcctcttagaagctcaggcagcttaa
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