Paenarthrobacter nicotinovorans: JMY29_01080
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Entry
JMY29_01080 CDS
T08055
Name
(GenBank) alpha-amylase
Organism
pnv
Paenarthrobacter nicotinovorans
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_20
Alpha-amylase_C
Malt_amylase_C
RHS_repeat
Motif
Other DBs
NCBI-ProteinID:
UKF05896
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Position
complement(215412..218138)
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AA seq
908 aa
AA seq
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MTTAVLTASAVLPAGAAPGVSAKNPDPTAQHSIRGGVSNQNFYFVMADRFKNGTAGNDDG
GLGSDPMVSGFDPTRKGFYNGGDLKGLQDQLDYIQGLGTNALWLTPSFKNKAVQGDGTPA
NSSAGYHGYWVTDFTQIDPHLGTNAELKTLIDAAHARGMKVYFDIITNHTADVIQYQETS
SAPYISKETEPYRAATGEVFDDREYAGTQDFPALDAATSFPYTPVVPAAEKDVKVPSWLN
DPTLYHNRGNTNFAGEDSLYGDFFGLDDLFTENPKVVNGMMDVYKTWIRDFGVDGFRIDT
MKHVNDEFWQQFGPQVLSYAKEQGKDEFFMFGEVFDTSKTVTSKFTTKNKMQAVLDFGFQ
GAARSFASQGSKATGLADFFNGDDWYTDADSNVYQLPTFLGNHDMGRIGTFIAQDNPGAS
DAELLERDELAHELMYFSRGNPVIYYGDEQGFTGAGGDQDSRQTMFASKVQEYLDDDLLG
TNATHATDNFNTGHPLYKKISELAALAADHPTLRTGAQQDRYAADGAGIYAFSRIDAKEQ
REYIVAVNNSETAQTAAIPTYEAKQPFKLVYGEAAKNAKSGQDAKLAVTVPPLSAVVYEA
AGRLAKSKAAPAVVLKKPVTAAGDATRQKVTADVDGNSFYEVTFQARTAGGNWASIGTDD
NAPYQVFHDVSSLESGTSVEYRAVVLDNRGQTSASEPRSGVVGEPTQPETVTVAGSLNTE
LGCTEDWQPSCGQGLMSYEPTHRLWQLNVPNLPAGTYEFKAALNGTWDENYGAGGELNGP
NVVFTHPGGAVTFLYDHSTNVISAVSAGPQPAAVSVPGSLNSELGCSGDWMPDCAQAQLQ
LDPSDGIWKLSVPNLAAGSYEFKAAINGSWAENYGLGGAPNGSNIALKHDGGPVTFRYDP
AGHLVTVR
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggccgtcctcaccgcatcggcggtactcccggcaggcgccgcgcccggcgtc
tccgcgaagaaccctgaccccacggcccaacactccattcggggcggtgtcagcaaccag
aacttctacttcgtcatggccgaccgcttcaagaacggaaccgccggcaatgacgacggg
ggcctggggtccgatcccatggtgtccggcttcgatcccacccgcaaaggcttctacaac
gggggcgatctgaagggcctgcaggaccagctggactacatccagggcttgggcaccaac
gccctctggctcactcccagtttcaagaacaaggccgtacaaggtgacggaacgccggcg
aacagctccgccggatatcacgggtattgggtcaccgacttcacccagatcgacccccac
ctgggcaccaacgccgagctcaagacgctcatagatgccgcccacgcccgcggcatgaag
gtgtacttcgacattatcaccaaccacacggccgatgtgatccagtaccaggagacgtcc
tcggctccgtacatttccaaggaaaccgagccctaccgcgccgccacgggcgaggtcttc
gatgaccgcgagtacgccgggacgcaggacttccctgccctggacgcggcaacgtcgttc
ccctatacgcccgtagtccccgcggctgagaaggacgtcaaggttccttcctggctgaac
gaccccacgctctaccacaaccgcggcaacaccaactttgccggcgaagactccctgtac
ggcgacttcttcgggctggatgaccttttcaccgagaaccccaaggtggtcaacgggatg
atggacgtctacaaaacgtggatcagggacttcggagtggacggcttccgcattgacacc
atgaaacacgtcaatgacgagttttggcagcagttcggcccacaagtgctcagctatgcc
aaggagcagggcaaggacgagttcttcatgttcggggaggtcttcgatacctccaagacc
gtcacgtccaagttcaccaccaagaacaagatgcaagccgtcctggacttcggcttccaa
ggtgcagcccgcagcttcgcatcacaaggcagcaaggccaccggcctggcagacttcttc
aacggtgatgactggtacacggatgccgattccaacgtctaccaactgcccacattcctg
ggtaaccatgacatgggccgcatcggcacctttatcgcccaggacaacccgggagcatcc
gacgcggaactgttggagcgcgacgagctggcccatgagctgatgtacttctcgcgcggc
aacccggtgatctattacggcgatgagcagggcttcaccggcgccggcggggaccaggac
tcgaggcagaccatgttcgccagcaaggtccaggagtatttggatgatgaccttttggga
accaacgccacgcatgccacggacaacttcaacaccgggcacccgctgtacaaaaagatc
agcgagctcgcggccctcgcagcggaccaccccacgctccgtaccggtgcccagcaagac
cgctacgccgctgatggggccgggatctacgccttctcacgcatcgacgccaaggaacag
cgtgaatacatcgtggctgtgaacaacagcgagaccgcacagaccgcggcgatcccaacg
tacgaagcgaaacagccgttcaagctggtttacggtgaggccgccaagaacgccaagtcc
ggtcaggatgcgaagctggctgtcaccgtcccgccgctttccgcagtggtttatgaagca
gcggggcgactcgccaaatcgaaggccgcacccgccgtcgtactcaagaagccggtcacg
gcggctggggacgccacccgccagaaggtgacggccgacgtcgacggtaactcgttctat
gaggtcaccttccaggcgcgtactgcaggtggcaactgggcgtcgatcggcacggacgac
aacgcgccgtatcaggtgttccacgacgtctcgtcgctggagtccggcacgtccgtggag
taccgcgctgtggtgctggacaaccgcgggcagacgtccgccagtgagccccgcagcggt
gtggtgggagaaccgacacagcccgagaccgtcacggtggccggcagcctcaacaccgaa
ctgggttgcaccgaagactggcagccgtcctgcgggcaggggctcatgagctacgagccg
acgcaccgactgtggcagctgaatgtccccaacctgcccgcgggcacgtatgaattcaag
gccgcactcaacggcacgtgggacgaaaactacggcgcgggtggcgagttgaatggcccc
aacgtcgtgttcacgcaccccggcggcgccgtcacgttcctttacgaccactccaccaac
gtgatcagcgcggtctccgcgggcccgcagccggcggccgtttcggtacccggcagcctg
aattccgagcttggctgctcgggcgactggatgccggactgcgcccaggcgcagctgcag
ctggacccgtcggatgggatctggaagctgtcagtgcccaacctggccgccggcagttac
gagttcaaggccgccatcaatggctcctgggctgagaactacggtctcggcggcgccccg
aacggcagcaatatcgccttgaagcacgacggcggcccggtcaccttccggtacgacccc
gccggacatctggtcaccgtccgctaa
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