Paenarthrobacter nicotinovorans: JMY29_02940
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Entry
JMY29_02940 CDS
T08055
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pnv
Paenarthrobacter nicotinovorans
Pathway
pnv03030
DNA replication
pnv03430
Mismatch repair
pnv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JMY29_02940
03430 Mismatch repair
JMY29_02940
03440 Homologous recombination
JMY29_02940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnv03032
]
JMY29_02940
03400 DNA repair and recombination proteins [BR:
pnv03400
]
JMY29_02940
Enzymes [BR:
pnv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JMY29_02940
DNA replication proteins [BR:
pnv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JMY29_02940
DNA repair and recombination proteins [BR:
pnv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JMY29_02940
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
DnaX_C
AAA_30
Rad17
AAA_14
AAA_19
Mg_chelatase
nSTAND3
AAA_28
AAA_18
TsaE
Motif
Other DBs
NCBI-ProteinID:
UKF04565
LinkDB
All DBs
Position
complement(590339..593635)
Genome browser
AA seq
1098 aa
AA seq
DB search
MTVTTALYRRYRPDSFADVIGQEHVTEPLMTALRKNRVNHAYLFSGPRGCGKTTSARILA
RCLNCAEGPTDTPCGKCPSCIELARGGSGSLDVIEIDAASHGGVDDARDLRERATFAPVR
DRYKIFIIDEAHMVTSAGFNALLKIVEEPPEHIKFIFATTEPDKVIGTIRSRTHHYPFRL
VPPEPLMHYLELLCQQENVPVAPGVLSLVIRAGGGSVRDTLSVLDQLMAGAGPNGLDYEL
AVALLGYTHASLLDDIVDAVAAADAATVFRAVDRVIQTGHDPRRFVEDLLERFRDLIIVQ
AMPESAQAILRGMPADQIARMRNQATNLGAAELSRAADVTNTALTEMTGATSPRLHLELL
CARILLPSAEQTERGIAARIDRVERRLNFAGDGGTPAVAAGAPTAAAASAVPPAAAPVTQ
SAPAPTASPAPATEPAAVEQVPAASVPAVPEPSTAAGPRDAISAPRVSTNDWPVEERPAS
GRAAQAPPAPAAPSAAAAPTPAQTPQPEPVQASASAAPQTQPSQATPPAAPSQPAPSQPA
PSQPAPSQAMPSQAVPQAQPSPSASQAPASAPQPAAAPAPSAGGSGDVEALRRAWPDVLQ
TLTKIKRSTWALVEPNAQVAQFDGQVLTLAFTTGGLAGAFGRADHSENLRQAIHKTIGID
CQIVAVAGGNSSASSEPNPKAPTSRESPAAPTPTAGPAPAPVSSVDSAWGLAPATPASAT
VPSAGPHAGTVASSAPSRAADVAPAEKPQPPATPVPAAASVPATAAPAQATGQTPTPASA
PAPATTPTPTRPPAPAQAAPVPAVVETAPSSAGEYSYPDDDWGPPLDEDAPPLEEEPPAD
WEPPYGHQGEPRSYPQAASASSAAPTPAPAPASAPARTAAPQATTAHASSDDPWSRAVEQ
APGTWVVGTESNVGKNPQAAEETVVPAADTPDYEPAAAQVPEPTPAASYGHPTNAEENPS
SSWDVAPASNWPGTQAPSAAVSGAPTAGSIPTWPSLATQPEEARGSVATLEDDAPSGNPN
GRQSLYQRLTNSPEAQAGRVQAPVRTQAAPAAAPEDIPSPEDETIEESRVFGRAAVERIL
GGKLIEERALDGSPLQTR
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
gtgactgttacaactgccctgtatcgaaggtatcgcccggactctttcgcggacgttatc
gggcaggaacacgtcacagagcccctgatgacggcactccggaagaaccgcgtgaaccac
gcctacctcttctccgggccgcgcggctgcggcaagaccacctccgcgcgcatcctggca
cgctgcctgaactgcgccgaaggccccactgacacgccttgcggcaagtgccccagctgc
atcgaacttgcccgcggcggctcgggctccctggacgtcatcgagatcgatgccgccagc
cacggtggcgtggacgatgcccgcgatctccgtgagcgcgccaccttcgccccggtccgg
gaccgctacaagattttcatcatcgacgaggcccacatggtcacgtctgccggcttcaac
gctctgctgaagatcgtggaggagccgccggaacatatcaagttcatcttcgccaccacg
gagccggacaaggtcatcggcaccatccgctcccgcacgcaccactaccccttccggttg
gtgccacccgagccgctgatgcactaccttgagctgctctgccagcaggagaacgttcct
gttgccccaggcgtgctctcgctcgttatccgcgctggcgggggttctgtccgggacacc
ctttcggtgctcgatcagctcatggccggcgccggccctaacggcctggactacgagctc
gccgtggcgctgctcggctacacccacgcttcgttgctggatgacatcgtcgacgccgtc
gctgccgccgacgccgccaccgttttccgcgctgtggaccgcgtcatccagaccggccac
gacccccggcgcttcgtcgaggacctgctggagcgcttccgcgacctcatcatcgtgcag
gcgatgcccgaaagcgcccaggccatccttcgaggaatgcccgccgatcagatcgcccgc
atgcggaaccaggcaaccaacctgggcgcggctgagctgtcccgggccgcggacgtcacc
aacaccgcgctcacggagatgacgggcgcaacctcgccccggctccaccttgagctgctg
tgtgcgcgcatcctgctccccagcgctgaacaaaccgagcgtggtatcgccgcgcgcatc
gatcgcgtggaacgtcgcctgaacttcgcgggcgacggcggaacaccggctgttgctgcc
ggcgcgcctacagctgcggctgcttcggctgttccgccggcggccgcgcccgttacacag
tcggccccggcccccacggcttctcccgcacctgcaactgagcccgcagcagtggagcag
gtccctgcggcttcagtccctgccgttcccgaaccatccaccgcagctggtccgcgcgat
gccatctcagcaccgcgggtgtccaccaacgattggcccgtggaggaacgtccggcctcc
ggtcgcgcagcccaggctccgccggccccggctgctccgagtgctgcggctgctccgacc
ccggcacaaaccccgcagcctgagcctgtacaggcatctgcttccgcagcgccgcagacg
cagccatcacaagcaacgcccccggcagcgccgtcacaaccagcgccgtcacaaccagcg
ccgtcacaaccagcgccgtctcaggcgatgccctctcaggcagtgccgcaggcacagccg
tccccatccgcatctcaggcacctgcgtcagcgccgcaacctgcggctgccccggctccg
agtgctggaggcagcggggacgtcgaggcccttcgccgggcatggccggatgtgctccaa
acgctgaccaagatcaagcgcagcacgtgggccctcgttgagcccaacgcccaagttgcc
cagttcgacggccaggtgctgaccctcgcgttcaccaccggcggccttgctggtgccttt
ggacgcgcagaccactccgagaacctacgccaggcaatccacaagaccatcggcatcgac
tgccagatcgtcgcagtggccggcggcaacagttcagcgagctctgagccaaacccaaaa
gcgcctactagccgggagagtccggctgctccaacgccaacggctggcccggcaccggct
ccggtgtcttcggtcgactctgcgtggggcctcgctccagccacccctgcctcggcgacc
gttccatcggccggccctcacgcgggcacagttgcgtcctcggcgccatcccgtgcagct
gatgtggctcctgcagagaagccccagccaccggcgacccccgtcccggcagcagcatca
gttcctgccactgcggcgccggctcaggcaaccggccagacgcccactccggcttctgct
cccgctccagctacaacaccgacaccgacacgaccaccggcccctgctcaggctgcgcct
gtgcctgccgtcgtcgagaccgctccctcctccgccggagagtactcctaccctgacgac
gactggggtccgcccctggacgaggacgcccctccattggaggaagagccgccggctgat
tgggagccaccgtacggccatcagggagaaccccggagctacccacaagcagcctccgcc
tcctctgccgccccgacacctgcaccagcaccagcaagcgcgcccgcacgcacagccgcg
cctcaagccaccacggcacacgcctcctcggatgacccgtggtcccgcgcggtggaacaa
gctccgggcacgtgggtggtcggcacggaatccaacgtcggcaaaaacccgcaggcagca
gaagaaaccgtcgttccagcagcggacaccccggactatgagccggccgcggcacaggtc
ccggagccgacccccgccgcatcgtacggtcacccaaccaacgccgaagagaacccaagc
tccagctgggacgtcgcaccggcgtcgaactggcctggaactcaggcgcccagcgcggcc
gtttcgggtgcaccgaccgccggcagcatccccacgtggccgtcgttggcgacccaacct
gaggaagcacgcggttccgtcgccacgctcgaggacgacgcgccgtcgggcaatccgaac
ggacgccagagcctgtaccaacggctcactaacagccccgaagcccaggcaggacgtgtg
caggcgcctgtgcggacacaggcagcgccggccgccgcgccggaggacatccccagtccc
gaggacgaaaccatcgaagagtcgagggtctttgggcgggctgcggtggagcgtattctg
ggcggaaagctgatcgaagagcgcgccttggacggttctcccctgcaaacccgctga
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