Paenarthrobacter nicotinovorans: JMY29_04815
Help
Entry
JMY29_04815 CDS
T08055
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pnv
Paenarthrobacter nicotinovorans
Pathway
pnv03420
Nucleotide excision repair
pnv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pnv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JMY29_04815 (pcrA)
03430 Mismatch repair
JMY29_04815 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnv03400
]
JMY29_04815 (pcrA)
Enzymes [BR:
pnv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JMY29_04815 (pcrA)
DNA repair and recombination proteins [BR:
pnv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JMY29_04815 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
JMY29_04815 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
UKF04910
LinkDB
All DBs
Position
997402..999936
Genome browser
AA seq
844 aa
AA seq
DB search
MDMLFDPYADGPFKAGTKAAVKAAPELSRPGGGAPGPRLQEGGGGQSDAPASGGWGNPGT
PGLPSADALLQGLNPQQEEAVKHAGSPLLIVAGAGSGKTRVLSNRIAYLIATKRAHHGEI
LAITFTNKAAAEMRERIEALVGARAKGMWISTFHSSCVRILRREAANVGLNSNFSIYDSA
DSLRLITLVAKNLDLDPKKFAPKAIQHKISALKNELIDADSYSSAANHNDPFETAVADVF
KGYTQRLRQANAMDFDDLIAETVYMFRAFPALAESYRRRFRHVLVDEYQDTNHAQYALVR
EIVGLGTDTEVQPSELTVVGDSDQSIYAFRGADIRNIVEFEADYPNARTIKLEQNYRSTQ
NILSAANSVISRNPNRQEKRLWTAEGDGEKIIGYVGENEHDEAQFIAKEIDRLQDEEGLR
PGDVAIFYRTNAQSRSIEDVLVRVGLPYKVVGGTRFYERKEIKDALAYLRVLVNPDDDVN
LRRVLNEPKRGIGDRAEGAVAALAERERTSFMAAARRADQAPGMATRSVNAVLGFVKLLD
DLAEVASGSGAAAALEAVLEQTGYLAGLRASSDPQDESRVENLAELVAVVREYERDNPEG
SLGEFLEQVSLVADADQIPDAPGADIDAAVAEAKRMGVVTLMTLHTAKGLEFPVVFLTGM
EHGIFPHQRSATDPKELAEERRLAYVGLTRARQRLYVTRSEVRSMWGQSQYNPASQFLEE
IPSELVEWKREVMSRQAGGWGSAPIGSNRYGGSFWGAGTSRGVAASPTAGFDADVPAAVA
RNRVQPQKEVISVVVGDKVNHTSFGNGVVLGVEGAGDKTVAKVKFDVGEKRLLLRYAPLT
KLDA
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggatatgttgtttgacccctacgcagacggacccttcaaagcaggcaccaaagccgca
gtcaaggctgccccggagctatcacgcccaggtggtggtgcgccgggtccccgtcttcag
gagggcggcggcggccagtcggacgctcctgcctcagggggatggggcaacccgggcacg
cccgggctcccctctgccgatgccctgctccaagggctgaacccgcagcaggaagaggca
gtcaagcacgccggaagtccgctgctcatcgttgcaggcgcaggttcgggcaaaacgcgt
gtgctcagtaaccgcatcgcctacctcatcgccaccaaacgggcacatcacggcgaaatc
cttgccattaccttcaccaacaaggcagcagccgagatgcgggagcgcattgaagcgttg
gtgggagcgcgggccaagggcatgtggatctccaccttccactcctcctgtgtccgtatc
ctgcggcgcgaggccgccaacgtgggcctgaactcgaacttctccatctacgactccgcc
gactcgctgcgcctcatcaccctggtggccaagaacctggacctcgatcccaagaagttc
gcgcccaaggccatccagcacaagatctcggccctcaagaacgagctcatcgacgccgac
tcctactcctccgcggcgaatcacaatgaccccttcgaaaccgccgtggctgatgtcttc
aagggctacacgcaacgcctgcgccaggccaacgccatggatttcgacgacctcatcgca
gagaccgtctacatgttccgggctttccctgcgctcgcggagtcctaccggcggcgcttc
cggcacgtcctggtggacgagtaccaggacaccaaccatgcacagtacgcgctggtcagg
gagatcgtgggcctgggcactgacacggaggtccaacccagcgaactgaccgtggtgggt
gattcggaccagtccatctacgccttccgcggtgcggacatccgcaacattgtggagttc
gaagccgactatccgaacgcgcgcaccatcaagctggagcagaactaccgttccacgcag
aacatcctcagcgcagcaaactccgtcatctcccgcaaccccaaccgccaggaaaagcgg
ctgtggacggccgaaggcgatggcgagaagatcatcggttacgtgggcgagaacgagcac
gacgaagcccagttcattgccaaggaaatcgaccgcctgcaggacgaggaaggcctgcgt
cccggagacgttgccatcttctaccggaccaacgcacagtcgcgctccattgaagacgtc
ctggtccgcgtgggcctgccgtacaaggttgttggcggcacccgcttctacgagcgcaag
gaaatcaaggacgccctggcgtacctgcgcgtcctggtgaacccggacgacgacgtcaac
ctacgccgcgtgctcaacgaacccaaacgagggatcggcgaccgtgccgagggtgccgtc
gccgcccttgccgagcgcgagcggacatccttcatggctgcggcacgtcgggcggaccag
gcgccgggcatggccacgcgttcggtcaacgctgtcctcggcttcgtgaagctcctggac
gacctcgcggaagtcgcctccggatccggcgcggctgcagccctcgaggcagtcctggaa
cagaccggctacctcgccggactgcgcgccagttccgacccgcaggacgaatcgcgggta
gagaaccttgccgaacttgtagccgtcgtccgtgagtacgaaagggacaacccggagggt
tcactgggcgagttcctggaacaggtgtccctggtggctgatgccgaccagattccggac
gctcccggcgcggacatcgatgctgcggtggcagaagccaagcgcatgggagttgtcacg
ctgatgactctgcacacagcaaagggccttgagttccctgtggtcttcctgaccggcatg
gagcacgggattttcccgcaccagcgctcggccacggacccgaaggaactggcagaagag
cgccggctggcctacgtggggctcacccgggcacgccagcggctctacgtcacgcgctcg
gaggtccgcagcatgtggggccaaagccagtacaacccggccagccagttcctcgaagag
attccgtccgaactcgtggagtggaagcgcgaagtcatgagccggcaggcgggcggatgg
gggagtgctcccatcggttccaaccgttacggtggttcgttctggggtgcgggtacctcc
cgcggtgtggccgcgagcccaaccgcagggttcgacgccgacgttcctgccgccgtcgca
cgcaacagggtgcagccacagaaggaagtcatttccgtagtggtgggggacaaggtcaac
cacacgagtttcggcaacggcgtggtgctcggcgtcgaaggtgcgggcgacaagacggtc
gcgaaggtgaagttcgacgtcggcgagaagcgcctgttgttgcgttatgcgccgctgacc
aagcttgatgcatga
DBGET
integrated database retrieval system
