Paenarthrobacter nicotinovorans: JMY29_05880
Help
Entry
JMY29_05880 CDS
T08055
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pnv
Paenarthrobacter nicotinovorans
Pathway
pnv00020
Citrate cycle (TCA cycle)
pnv00190
Oxidative phosphorylation
pnv00650
Butanoate metabolism
pnv00720
Other carbon fixation pathways
pnv01100
Metabolic pathways
pnv01110
Biosynthesis of secondary metabolites
pnv01120
Microbial metabolism in diverse environments
pnv01200
Carbon metabolism
Module
pnv_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pnv_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pnv_M00149
Succinate dehydrogenase, prokaryotes
pnv_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pnv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JMY29_05880 (sdhA)
00650 Butanoate metabolism
JMY29_05880 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
JMY29_05880 (sdhA)
00720 Other carbon fixation pathways
JMY29_05880 (sdhA)
Enzymes [BR:
pnv01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
JMY29_05880 (sdhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
Thi4
DAO
DUF6020
FAD_oxidored
GIDA
Motif
Other DBs
NCBI-ProteinID:
UKF05114
LinkDB
All DBs
Position
complement(1226062..1227861)
Genome browser
AA seq
599 aa
AA seq
DB search
MQVHKYDVVIVGAGGAGMRAAIESGQRARTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTIKGGDYLVDQDAAEVMAKEAIDAVLDLEKMGLPFNRTPEGRIDQRRFGGHT
RDHGKAPVRRACYAADRTGHMILQTLYQNCVKHNVEFYNEYYVLDLLIVEEDAVREDGTP
YKQKRVAGVVSYDLASGELHVFQAKSVVFASGGAGKVFKTTSNAHTLTGDGMGIAFRRGI
PLEDMEFFQFHPTGLAGLGILLTEGARGEGAILRNSEGERFMERYAPTIKDLAPRDIVAR
AMANEVREGRGCGPNKDYVLLDLTHLEPAHIEAKLPDITEFARTYLGVEPFTDPVPVFPT
AHYAMGGIPTNITTEVLQDNDTIVPGLYAAGEVACVSVHGSNRLGTNSLLDINVFGKRAG
IAAAEYSKTADFVELPEDPEAMTRGILDGLLSGTGTERVAQIRKELQDTMDANMQVFRTK
ESLEQVLRDIASFEERYKNVTVQDKGKRFNLDLLEAVELGFLLDMAKVMTVGALHREESR
GGHYREDFPDRDDEKFMKHSMAYLDTSVTAASSAESVAGIRLETKPVIFTRYEPMERKY
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtccataagtacgacgtcgtcattgtcggtgcaggtggcgccggcatgcgcgcc
gcgatcgagtccggtcagcgtgcacgcacagcggtactgaccaagctctaccccacccgc
tcgcacaccggtgcggcccagggtggtatgtgcgcagcactggccaacgtcgaagaagac
aactgggaatggcacaccttcgacaccatcaagggtggcgactacctggttgaccaggac
gcagccgaggtcatggcgaaggaagccattgacgccgtgctggacctggaaaagatgggt
ctgccattcaaccgcacgcctgaagggcgcatcgaccagcgccgcttcggtggccacacc
cgtgaccacggcaaggctcctgtccgtcgcgcttgctatgcagccgaccgcacgggccac
atgatcctgcagaccctgtaccaaaactgcgtcaagcacaacgttgagttctacaacgag
tactacgtccttgacctgctgatcgtcgaggaagacgccgtccgcgaagacggcacgccg
tacaagcagaagcgtgtcgccggtgtggtctcctacgacctcgcctcgggcgagctgcac
gtcttccaggccaagtccgtggtgtttgcctccggtggcgcgggcaaggtcttcaagacc
acatccaacgcacacaccctcacgggcgacggcatgggcatcgccttccgccgcggcatt
ccgctggaagacatggagttcttccagttccacccgacaggtcttgcaggcctgggcatc
ctcctcaccgaaggtgcacgcggtgaaggtgccatcctgcgtaactcggaaggtgagcgc
ttcatggagcgctacgcccccaccatcaaggacctcgctccccgtgacatcgtggcccgc
gccatggccaacgaggtgcgtgagggccgcggttgtggtccgaacaaggactacgtcctc
ctggacctgacccacctcgagccggcccacatcgaagccaagctcccggacatcacggag
ttcgcccgcacctacctgggtgtggaaccgttcaccgatcccgtccccgtgttccccaca
gcgcactacgccatgggcggcattcccaccaacatcaccaccgaggtactccaagacaac
gacacgatcgttcccggactgtacgccgccggtgaggttgcctgtgtttccgtgcacggc
tccaaccgccttggcaccaactcgctcctggacatcaatgtcttcggcaagcgtgcaggc
attgcagctgccgagtactccaagacggccgacttcgtcgagctgcccgaggacccggaa
gcaatgacccgcggcatcctggatggcctgctcagcggcaccggcaccgagcgtgttgcc
cagatccgcaaggaactgcaggacaccatggacgccaacatgcaggtgttccgtaccaag
gaatccctggagcaggtccttcgcgacatcgcatccttcgaagagcggtacaagaacgtc
accgtccaggacaagggcaagcgcttcaacctggacctcctggaagcagtggagctgggc
ttcctgctggacatggccaaggtcatgaccgtcggtgctctgcaccgtgaagagtcccgc
ggtggccactaccgcgaggacttcccggaccgcgacgacgagaagttcatgaagcactcc
atggcttacctggacacgtccgtcactgccgcctcctcggcggaatccgttgcgggcatc
cgtctggagacgaagcccgtgatcttcacccgttacgagccgatggagcgtaagtactaa
DBGET
integrated database retrieval system
