Paenarthrobacter nicotinovorans: JMY29_07410
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Entry
JMY29_07410 CDS
T08055
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pnv
Paenarthrobacter nicotinovorans
Brite
KEGG Orthology (KO) [BR:
pnv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnv03016
]
JMY29_07410 (truB)
Enzymes [BR:
pnv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JMY29_07410 (truB)
Transfer RNA biogenesis [BR:
pnv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JMY29_07410 (truB)
Prokaryotic type
JMY29_07410 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UKF05403
LinkDB
All DBs
Position
1587205..1588146
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AA seq
313 aa
AA seq
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MLSGLVIVDKPQGWTSHDVVGRMRRLAGTRKVGHAGTLDPMATGVLVLGINKATRLLTYI
VGTSKTYTATIRLGETTITDDAEGDVTEARSAAAVTDDAIAAGVAALTGPIQQVPSSVSA
IKVNGERSYARVRSGEEVKLAARPVTIHRFDIHAVTRVDGGRVVDVDVTVECSSGTYIRA
LARDLGNALGVGGHLTALRRTQVGPYSIEQARTLEELAEELEVLDMSLAARALMPNRELS
DDETTEISFGRRIAAGPGAGTPDAATAEKPAAAFAPSGELVALLADTGTFAKPVLVFAPG
TGAGTGAGAGQAQ
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtgctttctggactggtaatcgttgacaaaccgcagggatggaccagccatgatgtggtt
ggccggatgcggcggctggccggcacccggaaagtggggcatgccgggacgctcgatccc
atggccacgggggtgctggtgcttggcatcaacaaagccacccggctcctgacctacatc
gtgggcacgtccaaaacctacacagccaccatcaggctcggtgaaaccaccattaccgat
gacgccgagggcgacgtcaccgaggcccgcagcgctgccgccgtcaccgacgacgccatt
gcagccggagtagcggccctgacgggccccatccagcaggtgcccagcagcgtcagcgcc
atcaaagtgaatggtgagcgctcttacgcccgggtccgctcgggggaagaggtcaaactc
gctgcccgccctgttaccatccaccgcttcgacatccacgcggtcaccagggtcgacggc
ggcagggtagtcgacgtcgacgtcaccgtggaatgttcttccggcacgtacatcagggcc
ttggcccgcgacctcggcaacgccctgggagtcggcggacacctcacggccctgcgtcgt
acccaggtgggaccgtactcgatcgagcaggccaggacgctggaggagctggcggaagaa
ctcgaggtcctcgacatgtcactggccgcacgtgccctcatgcccaaccgggaactgagc
gacgacgaaaccacggagatctcattcggccgccgcattgctgccggcccgggtgcaggc
accccggatgctgccacggccgagaagcccgccgcagcgttcgcgccgtcgggagagttg
gtcgctttgctggccgataccggaactttcgccaaaccggtcctggtctttgccccggga
acaggcgcgggaacaggcgcgggagcggggcaggcgcagtag
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