Paenarthrobacter nicotinovorans: JMY29_07575
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Entry
JMY29_07575 CDS
T08055
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pnv
Paenarthrobacter nicotinovorans
Pathway
pnv00300
Lysine biosynthesis
pnv00470
D-Amino acid metabolism
pnv01100
Metabolic pathways
pnv01110
Biosynthesis of secondary metabolites
pnv01120
Microbial metabolism in diverse environments
pnv01230
Biosynthesis of amino acids
Module
pnv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pnv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JMY29_07575 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JMY29_07575 (dapF)
Enzymes [BR:
pnv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
JMY29_07575 (dapF)
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Paralog
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Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
UKF05429
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All DBs
Position
1618363..1619331
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AA seq
322 aa
AA seq
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MDETASVPTRQPSAAGAAEPTSSLAGLAFSKGHGTGNDFVLIADPGDAHEITPEQVAHLC
DRHTGIGGDGLIRAVPSRFLPEGRALLEVDPAAEWFMDYRNGDGSLSEMCGNGVRVFVHF
LNEQGLVDLGPGETLTIGTRGGVKKVVRTVNGYAVDMGPWEFIFPDEATSKAMDALVSAD
GLEVARPGLSVSMGNPHTVVALAELSELSATQLFKAPVVDPKPVNGTNVEFVVPAEPLVE
DGVGTITMRVHERGVGETQSCGTGACAAAVAIRHWAGSTAPNDWHVKVPGGVVGVKFFPG
AGGREHVELSGPAVIVASGTLS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaccgcctcagttcccacccgccagccctcggctgccggggctgccgaaccc
acatcgagccttgccggattggcgttctctaaagggcacgggacaggcaacgatttcgtc
ctgatcgccgatcccggcgacgcccacgagatcactcccgaacaggtggcacacttgtgc
gatcgccacacgggcatcggtggcgacggacttatccgtgcagttccctcgcggttcctc
ccggaagggcgggcactcctggaagtggaccctgctgcggagtggttcatggactaccgc
aacggcgacggttcgctgtccgaaatgtgcggcaacggcgtgcgcgtcttcgttcacttc
ctcaatgagcagggattggtggaccttggtcccggcgaaaccctcaccatcggcacgcgt
ggcggagtcaagaaagtagtccgtaccgtgaacggatacgcggtggacatgggcccttgg
gagttcattttcccggacgaggcaaccagcaaggccatggatgccctggtcagcgcggac
ggcctggaagtggcacgccccggcctttcggtcagtatgggcaacccgcacacagtcgtt
gccttggccgaactcagcgagctttcagccacccagctgttcaaggctccggttgttgat
cccaagccggtcaacggcaccaatgttgaattcgttgtaccggccgaaccgttggtcgaa
gacggcgtcggaaccatcaccatgcgcgtgcacgagcggggagtgggggagacccagtcc
tgcggtacgggagcctgcgcagcagcggttgcaatccgtcactgggccggcagcacggcg
cccaacgactggcacgtcaaggttcccggcggcgtcgtcggtgtgaagttcttccccggc
gccggtggccgtgagcacgttgaactcagcggccccgccgtcatagtggctagcgggacg
ctttcctga
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