KEGG   Paenarthrobacter nicotinovorans: JMY29_07575
Entry
JMY29_07575       CDS       T08055                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pnv  Paenarthrobacter nicotinovorans
Pathway
pnv00300  Lysine biosynthesis
pnv00470  D-Amino acid metabolism
pnv01100  Metabolic pathways
pnv01110  Biosynthesis of secondary metabolites
pnv01120  Microbial metabolism in diverse environments
pnv01230  Biosynthesis of amino acids
Module
pnv_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pnv00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    JMY29_07575 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    JMY29_07575 (dapF)
Enzymes [BR:pnv01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     JMY29_07575 (dapF)
SSDB
Motif
Pfam: DAP_epimerase CntK_N
Other DBs
NCBI-ProteinID: UKF05429
LinkDB
Position
1618363..1619331
AA seq 322 aa
MDETASVPTRQPSAAGAAEPTSSLAGLAFSKGHGTGNDFVLIADPGDAHEITPEQVAHLC
DRHTGIGGDGLIRAVPSRFLPEGRALLEVDPAAEWFMDYRNGDGSLSEMCGNGVRVFVHF
LNEQGLVDLGPGETLTIGTRGGVKKVVRTVNGYAVDMGPWEFIFPDEATSKAMDALVSAD
GLEVARPGLSVSMGNPHTVVALAELSELSATQLFKAPVVDPKPVNGTNVEFVVPAEPLVE
DGVGTITMRVHERGVGETQSCGTGACAAAVAIRHWAGSTAPNDWHVKVPGGVVGVKFFPG
AGGREHVELSGPAVIVASGTLS
NT seq 969 nt   +upstreamnt  +downstreamnt
atggatgaaaccgcctcagttcccacccgccagccctcggctgccggggctgccgaaccc
acatcgagccttgccggattggcgttctctaaagggcacgggacaggcaacgatttcgtc
ctgatcgccgatcccggcgacgcccacgagatcactcccgaacaggtggcacacttgtgc
gatcgccacacgggcatcggtggcgacggacttatccgtgcagttccctcgcggttcctc
ccggaagggcgggcactcctggaagtggaccctgctgcggagtggttcatggactaccgc
aacggcgacggttcgctgtccgaaatgtgcggcaacggcgtgcgcgtcttcgttcacttc
ctcaatgagcagggattggtggaccttggtcccggcgaaaccctcaccatcggcacgcgt
ggcggagtcaagaaagtagtccgtaccgtgaacggatacgcggtggacatgggcccttgg
gagttcattttcccggacgaggcaaccagcaaggccatggatgccctggtcagcgcggac
ggcctggaagtggcacgccccggcctttcggtcagtatgggcaacccgcacacagtcgtt
gccttggccgaactcagcgagctttcagccacccagctgttcaaggctccggttgttgat
cccaagccggtcaacggcaccaatgttgaattcgttgtaccggccgaaccgttggtcgaa
gacggcgtcggaaccatcaccatgcgcgtgcacgagcggggagtgggggagacccagtcc
tgcggtacgggagcctgcgcagcagcggttgcaatccgtcactgggccggcagcacggcg
cccaacgactggcacgtcaaggttcccggcggcgtcgtcggtgtgaagttcttccccggc
gccggtggccgtgagcacgttgaactcagcggccccgccgtcatagtggctagcgggacg
ctttcctga

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