Paenarthrobacter nicotinovorans: JMY29_08120
Help
Entry
JMY29_08120 CDS
T08055
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pnv
Paenarthrobacter nicotinovorans
Pathway
pnv00470
D-Amino acid metabolism
pnv00550
Peptidoglycan biosynthesis
pnv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnv00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JMY29_08120 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JMY29_08120 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pnv01011
]
JMY29_08120 (murD)
Enzymes [BR:
pnv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
JMY29_08120 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pnv01011
]
Precursor biosynthesis
Amino acid ligase
JMY29_08120 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Oxidored_nitro
AlaDh_PNT_C
FAD_binding_3
2-Hacid_dh_C
NAD_binding_7
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
UKF05526
LinkDB
All DBs
Position
1741717..1743270
Genome browser
AA seq
517 aa
AA seq
DB search
MSSSSDRLKELTSWDSNWSGLRVVVTGIGLSGFSAADTLIELGAKVLVVDAATTDKAKAQ
ADTLKIVGAVDVLLGEDAVSTLPLIEDSLPDLVVTSPGWRPDQALLAAAKRKHIAVWGDV
ELAWRLRVREGRKTTDWLTITGTNGKTTTVGMTESMLQAAGLKAIAVGNVGTPILDALRD
PVDYDVFAVELSSFQLHWSHSLSPVASVCLNVAEDHVDWHGSYASYLADKAKVYENTQKA
AIYNAEQIETERMVENADVVEGCRAIGFTTNTPAISMLGVVDGLLVDRAFIAERKDSAAE
LAAMTDLGPVAPRHMVANALAAAALVRAYGVEPSAVKQGLVNYLPGAHRIQLVAKHNDIL
WINDSKATNPHAASAALSAFQNVVWIAGGLSKGVNYDELVKEHARRLKTVVLIGTDTASL
EASLQRHAPDVPVIAQAKGDTESVQTAAGNAASPIFGETIMAQAVASAAGVATSGDTVLM
APAAASMDQFSSYAHRGDAFVQAVRELVEGQAQTTEE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcatccgaccggctcaaggagctgaccagctgggattccaactggagcggg
ctgcgggtcgtggtgacgggtatcggcctgtccggtttttccgctgccgacaccctgatt
gagctcggagccaaggtactagtggtggacgccgcaaccaccgacaaagccaaagctcag
gcagacaccctgaaaatcgtcggcgccgttgacgtcctgctgggggaggacgctgtcagc
accctcccgctgattgaggacagcctgcccgacctcgtggtaacttctcccggctggcgt
ccggatcaagccctgctggcggcggccaagcgcaagcacatcgccgtatggggcgacgtc
gaattggcgtggcgactccgggtccgtgaagggcgcaagaccaccgactggctgaccatc
accggcaccaacggcaaaaccaccacggtggggatgaccgagtcaatgctgcaggctgcc
ggcttgaaggccatcgcggtcggcaatgttggaacgccgatcctggacgccctgcgggac
ccggtggactatgacgtctttgctgtggaactgtccagcttccagttgcattggagtcac
tcgctctcgcccgtggcaagtgtgtgcctcaatgtcgcggaggaccatgtggactggcac
ggttcctatgcgtcctacctcgcggacaaggccaaggtgtacgagaacacccaaaaggca
gcgatctacaacgccgagcaaatcgaaaccgagcgcatggtcgagaatgcggacgttgtg
gagggttgccgggccatcggttttaccaccaacactcctgccatcagcatgctgggcgtc
gtggacggtctgctggtggaccgcgctttcatcgccgaacgcaaggattcggcagcggaa
ctggccgcgatgacagatcttggcccggtggccccgcgccacatggtggccaacgcgctg
gccgccgcggcactggtccgggcctacggtgtggaaccctcggctgtgaagcagggactg
gtcaactacctccccggcgcgcatcggatccaactggtagccaagcacaacgacatcctg
tggatcaacgactcgaaggcgacgaatccgcatgcggcatcggcggcactctcggccttc
cagaacgtggtgtggattgccggcggcctgtccaagggcgtcaactacgacgagctggtc
aaggaacatgcacggcggctcaagaccgtggtgctcatcggaaccgacaccgcctcgctg
gaggcctccctccagcgacacgcgccggatgtcccggtgatagcccaggccaagggtgac
actgagagtgtgcagaccgcagccggtaacgccgcttcgccaattttcggcgagaccatc
atggcccaggccgtggcgtccgcagccggagtggcaacctcgggcgataccgtcctcatg
gcaccagcggctgcatccatggatcagttctcttcctacgctcaccgtggcgacgcattc
gtccaggcagttcgcgagcttgtggaagggcaggcacagaccaccgaggagtaa
DBGET
integrated database retrieval system
