KEGG   Paenarthrobacter nicotinovorans: JMY29_08320
Entry
JMY29_08320       CDS       T08055                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pnv  Paenarthrobacter nicotinovorans
Pathway
pnv00010  Glycolysis / Gluconeogenesis
pnv00020  Citrate cycle (TCA cycle)
pnv00260  Glycine, serine and threonine metabolism
pnv00280  Valine, leucine and isoleucine degradation
pnv00310  Lysine degradation
pnv00380  Tryptophan metabolism
pnv00620  Pyruvate metabolism
pnv00630  Glyoxylate and dicarboxylate metabolism
pnv00640  Propanoate metabolism
pnv00670  One carbon pool by folate
pnv00785  Lipoic acid metabolism
pnv01100  Metabolic pathways
pnv01110  Biosynthesis of secondary metabolites
pnv01120  Microbial metabolism in diverse environments
pnv01200  Carbon metabolism
pnv01210  2-Oxocarboxylic acid metabolism
pnv01240  Biosynthesis of cofactors
Module
pnv_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pnv_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pnv_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pnv_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pnv00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    JMY29_08320 (lpdA)
   00020 Citrate cycle (TCA cycle)
    JMY29_08320 (lpdA)
   00620 Pyruvate metabolism
    JMY29_08320 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    JMY29_08320 (lpdA)
   00640 Propanoate metabolism
    JMY29_08320 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    JMY29_08320 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    JMY29_08320 (lpdA)
   00310 Lysine degradation
    JMY29_08320 (lpdA)
   00380 Tryptophan metabolism
    JMY29_08320 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    JMY29_08320 (lpdA)
   00670 One carbon pool by folate
    JMY29_08320 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pnv04147]
    JMY29_08320 (lpdA)
Enzymes [BR:pnv01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     JMY29_08320 (lpdA)
Exosome [BR:pnv04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   JMY29_08320 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 DAO HI0933_like FAD_oxidored GIDA AlaDh_PNT_C Amino_oxidase 3HCDH_N FAD_binding_2 NAD_binding_8
Other DBs
NCBI-ProteinID: UKF05565
LinkDB
Position
complement(1786843..1788225)
AA seq 460 aa
MADQATAQEFDILVLGGGSGGYATALRAVQLGFTVGLVEKAKLGGTCLHNGCIPTKALLH
SAELADHARDSAKYGVNVTLDSIDMSAVNAYKDGIIAGKFKGLQGLIKSKGITVIEGEGK
LQGNNTVVVNGTAYTGKNIVLATGSYSRSLPGLEIGGKVITSDQALTMDYIPKSAIVLGG
GVIGVEFASVWKSFGVDVTIIEGLPSLVPNEDASIVKNLERAFKKRGIKFTTGIFFQGVE
QNDDGVKVTLVDGQTFEADLLLVAVGRGPVTANLGYEEAGITIDRGFVITNERLHTGVGN
IYAVGDIVPGVQLAHRGYQQGIFVAEEIAGLNPAIVEDINIPKVTYCEPEIATVGYTEKA
AKEKFGDDQVQTQEYNLAGNGKSSILGTGGIVKLVRQKDGPVVGIHMIGSRMGEQIGEAQ
LIVNWEAYPEDVAQLVHAHPTQNEALGEAHLALAGKPLHG
NT seq 1383 nt   +upstreamnt  +downstreamnt
gtggccgatcaggcaactgcgcaagaattcgacatcctggtactcggtggcggcagcggc
ggctacgccactgccctgcgggccgtgcagcttgggttcaccgttggccttgtggaaaag
gcaaagctcggcggaacctgcctgcacaatggttgcatccccaccaaggccctcctgcac
tcggccgaactggctgaccatgcacgcgattccgccaagtacggcgtgaacgtcacgctc
gacagcatcgacatgtcggccgtgaacgcctacaaggacggcatcatcgccggcaagttc
aagggcctccagggactcattaagtccaagggcatcaccgttatcgagggtgaaggcaag
ctccagggcaacaataccgtcgtagtgaacggcacggcttacacgggcaagaacattgtc
ctggccaccggttcctactcgcggtcgctcccgggccttgaaatcggcggcaaggtcatc
acctccgaccaggccctcaccatggactacatccccaagagcgccatcgtcctcggcggc
ggcgtcatcggcgtcgaattcgcttccgtgtggaagtccttcggcgtggacgtcaccatc
atcgaaggcctcccctccttggtccccaacgaggacgcctcgatcgtgaagaacctcgag
cgtgcgttcaagaagcgcggcatcaagttcaccactggcatcttcttccagggcgtcgag
cagaacgacgacggcgtcaaggtcaccttggttgatggccagaccttcgaagcagacctc
ctgctcgttgcagtaggccgcggtcccgtgaccgccaacctgggctacgaagaagccggc
atcaccatcgaccgtggcttcgtcatcaccaacgagcgcctccacaccggtgtcggcaac
atctacgccgtgggcgacatcgtcccgggagtccagctcgcacaccgtggctaccagcag
ggcatcttcgttgccgaggagatcgccggcttgaacccggccatcgtcgaagacatcaac
atccccaaggtcacgtactgcgaacctgaaatcgccacggtcggttacaccgaaaaggcc
gccaaggagaaattcggcgacgaccaggtgcagacccaggaatacaaccttgccggaaac
ggcaagagctccatcctcggcacaggcggcatcgtcaagcttgtccgccagaaggatggc
cccgtagttggtatccacatgattggttcacgtatgggtgaacagatcggtgaagcccag
ctgatcgtgaactgggaagcctacccggaggacgtggcccagctggtccacgcccacccg
acccagaacgaagctttgggcgaagcccacctcgccctcgcgggcaagccgctccacggc
taa

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