Paenarthrobacter nicotinovorans: JMY29_11685
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Entry
JMY29_11685 CDS
T08055
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pnv
Paenarthrobacter nicotinovorans
Pathway
pnv00730
Thiamine metabolism
pnv01100
Metabolic pathways
pnv01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pnv00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
JMY29_11685 (thiC)
Enzymes [BR:
pnv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
JMY29_11685 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
UKF02438
LinkDB
All DBs
Position
2497778..2499637
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AA seq
619 aa
AA seq
DB search
MSTTKTQHSPAQSESSPAQNEPVTQSLRSHSLAWLEDHDAGIRVPVTEIALEPSPNGQAN
APLQVYRTAGPGSDPVVGLEPFRAAWIESRGDTEAYSGRERNLLDDGKSAVRRGAASAEW
KGAQPVPRRAAEGKTVTQMHYARQGLVTPEMRFVALRENCDVELVRSEVAAGRAIIPNNI
NHPESEPMIIGKAFLVKINANIGNSAVTSSIAEEVDKLQWATQWGADTVMDLSTGDDIHT
TREWLIRNSPVPIGTVPIYQALEKVNGEANKLTWEIFRDTVIEQCEQGVDYMTIHAGVLL
RYVPLTANRVTGIVSRGGSIMAGWCLAHHQENFLYTHFDELCEIFAKYDVAFSLGDGLRP
GATADANDAAQFAELDTLAELTQRAWEFDVQVMVEGPGHIPFHLVRENVERQQELCKGAP
FYTLGPLVTDVAPGYDHITSAIGATEIARYGTAMLCYVTPKEHLGLPNKDDVKTGVITYK
IAAHAADLAKGHPGAHERDDALSKARFEFRWRDQFALSLDPVTAESFHDETLPAEPAKTA
HFCSMCGPKFCSMRISQDIRDEYGSAESQAAIAGMYSGMREKSAEFLASGGKVYLPELQV
ASARTPEPIDGTTQSGSLN
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaccaccaaaacacagcacagccctgcccaaagcgagtccagccctgcccaaaac
gagcctgttacgcagtccctgaggtcccactcgctggcatggcttgaagaccatgacgcc
ggaatccgcgtccccgtgacggaaatcgcgctggagccctcccccaatggccaagccaac
gcaccactgcaggtgtaccggacggcaggcccgggcagcgatcccgtcgtgggcctggaa
ccgttccgggccgcatggatcgagtcccgcggcgacactgaggcttattccggccgcgaa
cggaacctgctcgacgacggcaagtcggctgttcgccgcggggccgcctcagccgagtgg
aagggcgcgcaaccggtgcctcgccgcgccgccgagggtaagaccgtcacccagatgcac
tacgcacggcaaggcctggtgacgcctgagatgcgcttcgtggcgctgcgcgagaattgc
gatgtcgaactggtccgcagcgaggtcgccgccggccgcgcgatcattcccaacaacatc
aaccaccccgaatccgagcccatgattatcggcaaggccttcctggtgaagatcaacgcc
aacatcggcaattcggccgtcaccagttcaattgccgaagaagtggacaagcttcagtgg
gctacgcagtggggcgcggacaccgtcatggacttgtcaaccggcgacgacatccacacc
acccgcgagtggctgatccgcaactcccctgttccgatcggcaccgttcccatctaccag
gcgctggaaaaggtcaatggagaagccaacaagctaacgtgggaaatcttccgtgacaca
gtgatcgaacagtgcgagcaaggcgtggactacatgacgatccatgccggtgtactgctc
aggtacgtaccgctgaccgccaaccgcgtgacaggcatagtttcccgtggcgggtccatc
atggcggggtggtgcctggcccaccaccaggagaacttcctgtacacgcacttcgacgag
ttgtgcgaaatttttgccaagtacgacgtcgcgttttccctcggagacggcctgcgtccc
ggcgctaccgctgatgccaacgacgccgcacaattcgcggaactggacaccctggccgaa
ctcacacagcgcgcctgggaattcgacgtgcaggtgatggtggaaggtcccgggcatatc
ccgttccacctggtccgcgaaaatgtggaacggcagcaggaactctgcaaaggggcaccg
ttctacaccctgggtccgctggtcaccgacgtcgcccccggctacgaccacatcacctca
gccatcggtgccacggagatcgcccgctacggtacggccatgctctgctacgtcacgccc
aaggaacacctgggcctacccaacaaagacgatgtcaaaacaggggtgatcacgtataag
atcgcggcgcacgcggcggacctcgccaaggggcaccccggcgcacatgagcgcgacgac
gcactttccaaggcgcgcttcgagttccggtggagggaccagtttgctctgtccctcgat
cctgtgacggccgagtcgttccacgatgaaacgctgccggccgaacccgccaaaacggcg
cacttctgctcaatgtgcggacccaagttctgttccatgcgcatcagccaggacatccgc
gacgaatacggttcagcagaatcccaagcggcgatcgcaggaatgtacagcgggatgcgg
gaaaaaagtgcggagttcctcgcctccggtggaaaggtctacctgccggagctccaggtg
gcctccgcacggacgccggagccgatcgatgggaccacgcagtcaggaagcctgaactga
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