Paenarthrobacter nicotinovorans: JMY29_12200
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Entry
JMY29_12200 CDS
T08055
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pnv
Paenarthrobacter nicotinovorans
Brite
KEGG Orthology (KO) [BR:
pnv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnv03400
]
JMY29_12200
DNA repair and recombination proteins [BR:
pnv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JMY29_12200
Archaeal homologous recombinant proteins
JMY29_12200
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
UKF02532
LinkDB
All DBs
Position
complement(2619345..2620520)
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AA seq
391 aa
AA seq
DB search
MRLLHTSDWHLGRSFHGVGMLEAQRGFVDQLVTFVDANSVDVVLIAGDVYDRALPGLDVV
TLLDDALVRLTRAGASVVLTSGNHDSAIRLGFASRLLERGGVHLRTRVEDLDSPIVFPFG
AERDAPGQVAIYGIPFLEPRLVAERLGVDSANHFDVTQQAVGLIKKDVERRRESGPVYPV
VLAHTFASGGITSESERDLSIGGLGAVPLDLFEGFTYTALGHLHGRQQLAGNVRYSGSPL
AYSFSEAKHSKGAWLVDINPSGDIDVQEVVWEAPKTLAVLRGTLDELLESGEYAWAEEAY
CQITITDAQRPTQAMERLRVRFPDTLVLSFDPEGAGTRTTTSYSDRLAKAQDDLGVCCGF
LEHVRDRGAGEAEEAALREALEAVRLEEAEL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcggttactccatacttcggattggcatctgggccggtcgttccacggcgttggcatg
ctcgaggcccaacgcggcttcgtggaccagctggtgactttcgtcgacgccaactcggtg
gacgtcgtgctgatcgcaggggacgtttatgatcgcgccctgccgggcctggacgtcgtc
acgctgttggatgatgctttggtgcggctcacccgggccggggccagcgttgtgctcacc
agcggcaatcacgattccgccatcagactgggtttcgcttcccggttgctggaacgaggg
ggagtgcacttgcgcacgcgggtggaggacctggacagccccattgttttcccttttgga
gccgaacgggacgccccgggccaagtggcgatctacggaattcccttccttgaaccccgc
cttgtggccgagcggctgggcgtggactctgccaaccactttgacgtcacacagcaggca
gtagggcttatcaagaaggacgttgaacgtcgccgcgaatccggacctgtctacccggtg
gtcctggcacacacctttgccagcggaggcatcacgtccgaaagcgagagggacctcagt
atcgggggactgggagcggtgcccttggacctcttcgaaggattcacttacacggcactg
ggccacctccacggacggcagcaattggccggcaatgtccgctactcgggttcgccgctg
gcgtactcattctccgaagccaagcacagcaaaggtgcctggttggtggacatcaacccg
tcaggggacatcgacgtccaggaagtagtgtgggaagcccccaagaccctggccgtactg
cgcgggactttggatgagctcctggagtccggggagtatgcctgggcggaagaggcctac
tgccagatcaccattactgacgcacagcggccaacccaggccatggaaagactgagagtc
cgctttccggacacgttggtcctttcctttgatcccgaaggcgccgggacccggactacg
acgagctacagtgaccgactcgccaaggcccaggacgatctcggagtctgctgcggcttt
ctggagcatgtccgggaccgcggagccggcgaggccgaagaagctgcgctccgggaagca
ctcgaagccgtccgcttggaagaggcggaactgtga
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