Paenarthrobacter nicotinovorans: JMY29_13425
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Entry
JMY29_13425 CDS
T08055
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pnv
Paenarthrobacter nicotinovorans
Pathway
pnv00300
Lysine biosynthesis
pnv01100
Metabolic pathways
pnv01120
Microbial metabolism in diverse environments
pnv01230
Biosynthesis of amino acids
Module
pnv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pnv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JMY29_13425 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pnv01002
]
JMY29_13425 (dapE)
Enzymes [BR:
pnv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
JMY29_13425 (dapE)
Peptidases and inhibitors [BR:
pnv01002
]
Metallo peptidases
Family M20
JMY29_13425 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
UKF02762
LinkDB
All DBs
Position
complement(2890258..2891388)
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AA seq
376 aa
AA seq
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MTLNPAPALLDLRQDVALLTAAIIDFNSVSGNETELADAVEAALRAIPAYTVVRDGDAII
ARTELGRAERVILAGHLDTVPLPTVEGSLGTVPATWESGTPGEGVLYGRGTTDMKGGVAV
QLALAATLFEDGAQPDKDVTFVFYDHEEVEAVKSGLGRLVRNHGDLLKGDFAILLEPTHG
TVEGGCNGTSRFEATTLGETAHSARAWMGVNAIHAAAPILERLAAYEPRTINVDGLDYRE
SLNAVKINGGTAGNVIPDRCVVEINYRFAPDKTPDEAEAHVRELLEGFDVVRTDAAAGAR
PGLNHPAAASFVAAVGAEPKPKYGWTDVARFSELGIPAVNFGPGDPLLAHKDNEHVDADA
IRECLRALRTWLAPSA
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
gtgaccctgaaccctgctcccgcccttcttgacctgcgccaggatgttgccctgctgacg
gccgcgatcatcgacttcaactccgtctccggcaacgagaccgaactggccgatgccgtg
gaggctgcccttcgcgccatccctgcctacacggtggtccgcgatggcgatgccattatt
gcccggaccgaactcgggcgagctgaacgggtgatccttgccggccacctggacactgtt
cccctgcccaccgtcgagggatcgctcggcactgtaccggcaacctgggaatcgggcacg
ccgggggagggtgtcctgtacggccgcggcaccactgacatgaagggcggcgtcgcagtt
caactcgcccttgcggcaacactgttcgaagacggagcgcagccggacaaggacgtcacc
ttcgtcttctacgaccacgaggaagtggaagcggtcaagagcggccttggcaggttggtc
cgcaaccacggagacctgctgaagggtgacttcgccatccttttggagccaacccacggc
acggtggaaggcggctgcaatggaaccagccgtttcgaggccaccacgctcggtgagacg
gcccattccgcacgggcctggatgggagtcaacgccatccacgctgcagccccgattctt
gaacgcctggctgcctacgagcccaggaccatcaacgtggacggcctggactaccgtgag
agcctcaacgcggtgaagatcaacggtggaaccgccggcaacgtgatcccggaccgttgc
gtggtggaaatcaactaccgcttcgccccggacaagaccccggatgaggccgaggcccat
gtccgcgaactcctggaaggcttcgacgtagtccgcacggacgctgctgccggcgcgcga
ccgggactgaaccacccagcggctgcttcctttgttgccgcggtgggcgccgagccgaaa
cccaaatacggatggaccgacgtcgcgcggttcagcgagctgggaatcccggcggtgaat
ttcggccccggcgatccgctgctggcgcataaggacaacgaacacgtcgacgccgacgcc
atccgtgagtgcctccgtgcactgaggacgtggttggcgccgtcggcataa
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