Paenarthrobacter nicotinovorans: JMY29_14020
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Entry
JMY29_14020 CDS
T08055
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pnv
Paenarthrobacter nicotinovorans
Brite
KEGG Orthology (KO) [BR:
pnv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnv03016
]
JMY29_14020
Enzymes [BR:
pnv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
JMY29_14020
Transfer RNA biogenesis [BR:
pnv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JMY29_14020
Prokaryotic type
JMY29_14020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
UKF02872
LinkDB
All DBs
Position
complement(3021300..3022190)
Genome browser
AA seq
296 aa
AA seq
DB search
MNERKPAAPVMGGGGFLRVRLDLSYDGGPFSGWALQPGLRTVQGSLEEALALLLQRPVRV
TVAGRTDAGVHARGQVVHLDVTEAEWLSLPRGHELDPAVALLRRLRGALSRILGDLTGAV
EVHDAGLAPEGFDARFSALWRRYSYRIADGPGRWDPVLRGITLWHKAPLDVALMNQGSRS
LLGLQDFRSYCKPREGATTIRELQKFSFDRGSDGVIVATVQADAFCHNMVRSLVGSALRV
GEGLETPEWLHSRLLERRRDAKSVLAAPHPLVLEEVAYPSDSELLARAELTRARRE
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacgaaaacccgctgcccccgttatggggggcggcgggtttttgcgtgtccgg
ctggatctttcgtacgacggcggcccgttcagcggctgggcattgcagccggggctgcgt
accgtgcagggttctttggaagaagcactggcgctgttgttgcaacgacccgtccgcgtt
actgttgccggccgcaccgatgccggcgtccacgcccgcggccaggtagtacatctcgat
gtcaccgaagccgagtggctctcactgccgcgtggccacgaacttgatcccgccgtcgcc
cttttgcgacgcctccgcggagccttgagccgtatcctcggcgacctcaccggtgcagtg
gaagtgcacgacgccggtctggcgccggagggtttcgacgcgcgcttctcggcgttgtgg
cgcaggtacagttaccggattgccgacggtccggggagatgggacccggtgctccgtggg
atcacgctgtggcacaaagcgcccttggatgttgccttgatgaaccagggttcccggtcc
ttgttggggctccaggattttcgttcctactgcaaaccccgggaaggtgccaccaccatc
cgtgagctgcagaagttctcgtttgatcgcggaagcgacggcgtcatcgtggctaccgtt
caggctgacgctttctgccacaacatggtgcgttcgttggttggttcggctctgcgggtg
ggggaggggctggaaactcctgaatggctgcactcgcggctgttggagcgccgacgcgat
gccaagtcggtgctcgccgcgcctcatccgttggtcctcgaagaagtggcctacccgtcg
gacagtgagctgctcgccagggctgaattgacgcgggcccggcgggagtag
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