Paenarthrobacter nicotinovorans: JMY29_14030
Help
Entry
JMY29_14030 CDS
T08055
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pnv
Paenarthrobacter nicotinovorans
Pathway
pnv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pnv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JMY29_14030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnv03021
]
JMY29_14030
03400 DNA repair and recombination proteins [BR:
pnv03400
]
JMY29_14030
Enzymes [BR:
pnv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JMY29_14030
Transcription machinery [BR:
pnv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JMY29_14030
DNA repair and recombination proteins [BR:
pnv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JMY29_14030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UKF02874
LinkDB
All DBs
Position
complement(3022862..3023872)
Genome browser
AA seq
336 aa
AA seq
DB search
MLIAQRPTLSEEVVSENRSRFIIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTEIILNIKNLSVSSEHDEPVVAYLRKQGPGVVTAADIAPPAGVEFHN
PDLHIATLNSKGKFELELTIERGRGYVSAAQNKSGDSEIGRIPVDSIYSPVMKVTFRVEA
TRVEQRTDFDKLIVDVETKQAIAPRDAVASAGTTLVELFGLARELNTAAEGIEIGPSPTD
AALAADMALPIEDLDLTVRSYNCLKREGIHTVGELVARSEADLMDIRNFGAKSIDEVKAK
LVELGLSLKDSPPGFDLAARAAAIEEDDAAFSDDEL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattgcacagcgccccaccctgtctgaagaagttgtatccgagaaccgctcccgt
ttcatcattgaaccgctggagccgggcttcggttacaccctcggaaactccctccgccgt
accctgctctcctccatccccggtgccgctgtaaccagcatccggatcgatggcgtgctg
cacgagttcaccacggttcccggtgtcaaggaagatgtcactgagatcatcctgaacatc
aagaacctttcggtttcctccgagcacgatgagccggttgttgcatacctgcgcaagcag
ggccccggagtcgtcaccgccgcggacattgctccgccggccggcgtcgaattccacaac
ccggatctgcacattgccactctgaactcgaagggcaagttcgaactcgaactgaccatc
gagcgcggccgtggctacgtttcggcagctcagaacaagtccggcgactccgagatcggc
cgtattccggttgactcgatctactcgccggtcatgaaggtaactttccgcgtggaagct
acccgtgttgagcagcgcaccgacttcgacaagctcattgtcgacgtcgagaccaagcag
gcaatcgctccccgcgatgctgttgcttccgcaggcaccaccctggtggaactgttcggt
ctggctcgtgagctgaacaccgcagctgaaggtatcgagattggcccgtcgccgacggac
gctgccctggcagccgacatggctctgccgatcgaggatctggacctcaccgtccgttcc
tacaactgcctcaagcgtgagggcatccacaccgtgggtgaactcgttgcccgctccgag
gctgacctgatggacatccgtaacttcggtgcgaagtccatcgacgaggtcaaggcaaag
ctcgtcgaactgggtctgtccctcaaggactcccctcccggtttcgatctcgcagcccgc
gccgcagccatcgaagaggacgacgccgcgttcagcgacgacgagctctaa
DBGET
integrated database retrieval system
