KEGG   Paenarthrobacter nicotinovorans: JMY29_18345
Entry
JMY29_18345       CDS       T08055                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pnv  Paenarthrobacter nicotinovorans
Brite
KEGG Orthology (KO) [BR:pnv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pnv02048]
    JMY29_18345
Enzymes [BR:pnv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     JMY29_18345
Prokaryotic defense system [BR:pnv02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   JMY29_18345
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD HSDR_N DUF4145 Helicase_C AAA_19 ATG16 Nitrate_red_gam CCDC93_CC Mis12 HerA_C
Other DBs
NCBI-ProteinID: UKF03689
LinkDB
Position
3954258..3957656
AA seq 1132 aa
MGAVTSNFGFMLGEWPELAQQARRAEQFARVDPRASVFYARYTIERIVEWLYQVEPGLVT
PYKDDLNALLNEPTFKNLVGGPIANKLTIIRKAGNNAVHNSVGPTIQGAELVLRELHHVC
YWLARNYAKTGSQLPPSLVFDASILAPKPKTPAQQQSPEELQALESQLKAQNEALAQAAA
DSADLKAQLEILQAEVAEAKKQNQTVPDHHDYDEALTRRHLIDLELNEAGWPLTNTEDRE
FKVDTMPTASGTLSGVGYVDYVLWGADGLPLAVVEAKRTTKDPHVGKQQAKLYADCLERR
YGRRPIIYYSSGYETWIWDDTMYPERSLQGFHTRDQLQLLINRRQSRKPLAEQAIDNSIV
ERPYQHNAIRAVTEAYEKDFERKALVVMATGTGKTRTVVALAKLLQEANWAKRVLFLADR
VALVKQAANAFKAHLPGSSPVILGSDDEADSRIHVATYPTMMNLINRTEGKLGQRTFGIG
HYDLIIVDEAHRSVYQKYRAIFQYFDSLLIGLTATPQSEVDRNTYSLFGIEDNVPTFAYE
LSEAIEAGYLVPPRVVPVPLKFPDQGISYEDLPEAEKEQWDELEWDEDGEIPDSVDSSVI
NTWLFNADTVDKALEVLMTRGHKVAGGDRLGKTIIFAKNNRHAEYIAERFDKNYPAYKGQ
FARVITYQVNYAQILIDQFSTTESDPHIAISVDMLDTGVDVPDVVNLVFFKMVRSKTKFW
QMVGRGTRLRPELYGPGEDKKDFFIFDLCRNAEFFNAGMPSNEGSVGKSLAETTFAARVQ
LLQTFTDLQWDPQAPVVADLRQTLKHAVDRLPLDNFLVKPARKWVDRFAEEAAWKSLAAE
DFQALQTQIARLATIGAPADTEEARRFDYLMLQAELASLQGSAVGPFRTKIQAIASALQD
QQSIPAIAAQLPLLETILHDDEWESVSLEWLEDIRKRLRGLVHLIEKRKRKVVYTNFQDE
LGVLEEVELVGTTNGFVDLPRYKEKMRSYLAQYEEHATIQRLRRNKQLTALDLAELERIL
LESGLGSLEDLNRAANDGLGLFVRSLVGLDREAVEEALSEFVAGTTLTAQQLNFLNVLTN
HLMENGKVSPKALFNSPYNELAPSGPDVLFGDEKIGQLISILRSIENHAKVG
NT seq 3399 nt   +upstreamnt  +downstreamnt
atgggggcagttaccagcaactttgggttcatgctgggcgagtggcccgagttggcccag
caagcacgccgggccgaacaattcgcccgggtcgatccacgcgcttccgtgttctacgcc
cgttacaccatcgaacgcattgttgagtggctttatcaagtggagccagggttggtgacc
ccctacaaagatgacctcaacgcgttactgaacgagcccacctttaagaatcttgtgggc
ggtcctattgccaacaagctcacgatcattcgcaaagccggtaacaatgcggtccacaat
tccgttggccccaccatccagggcgctgaactcgtgctccgcgaactgcaccacgtttgc
tattggctcgcgaggaactacgccaaaaccggtagccagctgccgccgtcgttggtcttc
gacgccagtatcctggccccaaagccgaagacgccggcacagcagcagtcgcccgaagaa
ctccaggcactcgagagccaactcaaagcccaaaacgaggcccttgcacaagcagcagcg
gattcggcagaccttaaggcccagctggagattctgcaggctgaagtcgcggaggccaaa
aaacagaaccagaccgtccctgaccaccacgactatgacgaagccctgacccgcaggcac
ctcatcgatcttgagctgaacgaggcaggctggccgctcaccaatacagaagaccgcgag
ttcaaggtagacaccatgcccacggcgagcggcacgctcagcggagtgggctacgtggat
tacgtgctgtggggcgctgacgggctgcccctcgcagtggtcgaggcgaaaaggacaacc
aaggatccccatgtagggaagcaacaagccaagctgtacgccgactgcctggaacgtcgc
tatggtcgacgaccgatcatctactacagctccggttacgagacatggatctgggacgac
accatgtacccggagcgctcgttgcagggcttccacacaagggatcaacttcaactgctg
atcaaccgccgtcagagccgaaagcctctggctgaacaggcaatcgacaactccatcgtc
gaacgcccctaccagcacaacgccatccgggccgtcactgaagcctacgaaaaggacttc
gagcgcaaggcgcttgtagtcatggcgacaggcacgggcaagacgcgcaccgtcgtcgca
ctcgccaagctcctgcaggaagccaactgggccaaacgcgttctgttcctcgcggatcgg
gttgcgttggtcaagcaagcggccaacgccttcaaggcccaccttcccggttccagccct
gtcattctgggctcggacgatgaagcagacagccgcatccatgtggctacatatccgacg
atgatgaacctcatcaaccggaccgagggaaagcttggccagcggacctttggcattggc
cactatgacctcatcatcgttgatgaagcccacaggtcggtctaccaaaaatacagggcc
atcttccagtacttcgattcactcctcatcgggctgacagccacgccacagtcagaggtg
gaccgcaacacctacagccttttcggcatcgaggacaacgttccaacgtttgcctatgag
ctcagcgaggccatcgaggccggatatcttgtgccaccgcgggtcgttccggttccgctg
aagtttcctgaccaaggcatctcgtacgaggacctcccagaggctgaaaaagagcagtgg
gacgagctcgaatgggacgaagacggcgagatcccggactcggtcgattcaagcgttatc
aatacctggctgtttaacgccgacacagtggataaggcactggaagtccttatgacccgc
ggccacaaagtcgccggcggggatcgcctgggcaagaccatcatcttcgcgaagaacaac
agacacgcggagtacattgctgaacgctttgacaagaactacccggcttacaagggtcag
tttgctcgcgtcatcacctatcaggtgaactacgcccagattctcatcgaccaattctcg
accaccgagagtgatccccacatcgctatttcggtagacatgctggacaccggcgttgac
gtgccggacgtcgtcaacctcgtctttttcaagatggtcaggtccaagaccaaattctgg
cagatggtgggccgcggaacgcgactccggccggaactgtatgggccgggcgaggacaag
aaggacttctttatcttcgacctctgccgcaacgccgagttcttcaatgcgggaatgccc
agcaatgaaggctctgtgggtaagtcactcgcggagactacgttcgctgcgcgcgtccag
ctcctgcaaactttcactgaccttcaatgggacccccaagcgcccgttgttgccgacctc
cggcaaaccctgaaacacgcagttgaccggcttccgctggacaacttcctcgttaaaccg
gcacgcaaatgggtggacaggttcgccgaagaagcagcctggaaatcgttggcagccgag
gacttccaggctttgcaaacccagatcgccaggctcgctaccatcggcgcgcctgcggat
acggaagaggccaggcggttcgactacctgatgcttcaggcagagttggcgtcgctgcag
ggatcggcggttgggccgttccggacaaagatccaagccatcgcctcggccttgcaggac
cagcagagcatcccggccatcgctgctcagttgcccctgctggaaaccattctccacgac
gacgaatgggaatccgtttcgttggaatggcttgaggacatccgcaagcggctccgcgga
ttggtccatctgatcgagaagcggaagcgcaaagtggtctacacaaacttccaggacgag
ctcggcgtgcttgaggaagtcgaactggtggggacaaccaatggcttcgtcgacctccct
cggtacaaagaaaaaatgcgttcgtacctggcgcaatacgaggagcatgcaaccattcaa
cggctccggcgtaacaagcaactgacggcgttggaccttgccgagcttgaacgcattctt
cttgaaagcggtttgggttcgcttgaagacttgaatcgtgccgccaacgatggcctcggc
ctctttgtccgttccctggttggtttggaccgcgaggccgtcgaggaagcgttgtcagag
tttgtagctggtactacgctcacagcccagcagctcaacttcctcaacgttctgaccaat
cacctgatggaaaacggaaaggtcagcccgaaggcgttgttcaattccccgtacaacgag
ctggccccgtccgggccggatgtgctgttcggcgatgaaaaaatcgggcagctgatcagc
atcctccgctccattgagaaccacgcgaaggttggctga

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