Paenarthrobacter nicotinovorans: JMY29_18530
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Entry
JMY29_18530 CDS
T08055
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pnv
Paenarthrobacter nicotinovorans
Pathway
pnv00260
Glycine, serine and threonine metabolism
pnv00460
Cyanoamino acid metabolism
pnv00630
Glyoxylate and dicarboxylate metabolism
pnv00670
One carbon pool by folate
pnv00680
Methane metabolism
pnv01100
Metabolic pathways
pnv01110
Biosynthesis of secondary metabolites
pnv01120
Microbial metabolism in diverse environments
pnv01200
Carbon metabolism
pnv01230
Biosynthesis of amino acids
pnv01240
Biosynthesis of cofactors
pnv04981
Folate transport and metabolism
Module
pnv_M00140
C1-unit interconversion, prokaryotes
pnv_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pnv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JMY29_18530
09102 Energy metabolism
00680 Methane metabolism
JMY29_18530
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JMY29_18530
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JMY29_18530
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JMY29_18530
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JMY29_18530
Enzymes [BR:
pnv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JMY29_18530
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GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
TetR_C_45
Motif
Other DBs
NCBI-ProteinID:
UKF03723
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Position
3994997..3996340
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AA seq
447 aa
AA seq
DB search
MVEPLIRPLAQADPEVDQAIAQELIRQQSTLEMIASENFAPTAVMEAQGSVLTNKYAEGY
PGKRYYGGCEHVDVIEQLAIDRLKSLFGAGFANVQPHSGAQANASAMHALINAGDTIMGL
NLAHGGHLTHGMRINFSGKLYNVVPYGVREDTHTIDMAEVERLALENKPQLIVAGWSAYS
RHVDFAEFRRIADLVGAYLMVDMAHFAGLVAAGLHPSPVPHAHIVTSTTHKTLGGPRGGV
ILTNDADIAKKVNSAVFPGQQGGPLEHVIAAKAVAFKMAAEPEFQERQARVLEGSKILAQ
RLLQDDVAAAGISVVSGGTDVHLVLADLRNSELNGQQAEDTLHRIGITVNRNAVPFDPRP
PMVSSGLRIGTPALAARGFGAEEFTEVSDIIATALIAAAATGTLDDATAVELRNRVTALA
DKLPLYPNLSTAGNGAGTEAELIGAAQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggttgaacccctgatccgcccgctcgcacaggcggacccggaggttgatcaggcgatc
gcccaggaactcatccgccagcagtccacgctggaaatgatcgcctctgaaaacttcgcc
cctacggctgtcatggaagcccagggctcagtgctgaccaacaagtacgccgaaggctac
ccgggcaagcgctactacggcggctgcgaacacgttgatgtgatcgaacagcttgccatc
gaccgcctgaagtccctctttggcgccggattcgccaatgtccagccgcactccggcgcg
caggccaacgcttcggcaatgcacgccctgatcaacgcaggcgacaccatcatgggcctg
aacctcgcccacggcggccacctgacccacggcatgcgcatcaacttctccggcaagctc
tacaacgtggtcccgtacggcgtccgcgaggacacccacaccatcgacatggcagaggtt
gagcgcctcgcgcttgagaacaagccccagctcatcgtcgccggctggtccgcctactcc
cgccacgtcgacttcgccgagttccgccgcatcgcggacctggtgggcgcgtacctcatg
gtggacatggcccacttcgccggcctggtggcagccgggctccacccgagccccgtgccg
cacgcgcacatcgtcaccagcaccacgcacaagaccctcggcggcccgcgcggcggcgtg
atcctgaccaacgacgccgacatcgccaagaaggtcaactcggctgtcttcccgggccag
cagggcggcccgctggaacacgtcatcgccgccaaggctgtggccttcaagatggctgcg
gaaccggaattccaggagcgccaggcccgcgtgctggaaggctccaagatcctggcccag
cgcctcctccaggacgacgtcgccgcggccggtatctccgtcgtcagcggcggaaccgat
gttcacctggtcctcgccgacctccgcaactccgaactcaacggacagcaggccgaggac
accctccaccggatcggcatcacggtcaaccgcaacgccgtcccgttcgacccccgcccg
ccgatggtctcctccggactccgcatcggcaccccggcactcgcggcccgcggcttcgga
gccgaagagttcacggaggtctcggacattattgcaacggcgttgatcgccgcagcggcg
accggcaccctggacgacgcgaccgccgtcgaactgcgcaaccgcgtgaccgcactggca
gacaagctgcccctctaccccaacctttccacggccggaaacggcgccggaaccgaagca
gaactgattggagcagcccagtga
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