Pseudodesulfovibrio nedwellii: SYK_00420
Help
Entry
SYK_00420 CDS
T09024
Name
(GenBank) DHH family phosphoesterase
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00920
Sulfur metabolism
pnw01100
Metabolic pathways
pnw01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
SYK_00420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnw03400
]
SYK_00420
Enzymes [BR:
pnw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
SYK_00420
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
SYK_00420
DNA repair and recombination proteins [BR:
pnw03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
SYK_00420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BDQ35682
LinkDB
All DBs
Position
complement(43563..44531)
Genome browser
AA seq
322 aa
AA seq
DB search
MENPVHKISDIIRDQDDFLIASHYNPDGDAIGSLCAMGHILTALGKKFSLFNQSGLPKQY
SFATPPAPIQDTLPKTMPNWTIVLDCGAKERMGNMLSARSEDTNFINIDHHLGNDKFGVE
NWVDHTQPAAGSMVALLAQELNVPLTGPLAENIYLAVATDTGFFTYGSTTPESLELAANM
LRDGLNIARMNMDITKQWSENRMRLWTEAMNNVELTDDKLVATTVITKEMFKRTGTTSAD
TENIINFLRRLKTVRVAVTFREEDVNTYKFSLRSYGEDNVQEVAAQFGGGGHKNASGGTI
TAPLAQAKAMLISAIGESLRIK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacccagtgcataagattagcgacatcattcgggatcaggacgacttcctgatc
gcttcgcattacaatcctgacggggatgcgattggttccctctgcgctatggggcacata
ctcacggcactcgggaaaaaattctcgctgttcaaccaatccggtctgccgaaacaatat
agcttcgccactccgcctgcccccattcaggacaccctgcccaaaacaatgcccaattgg
accattgttttggactgcggagccaaagaacgcatgggtaacatgttatccgcacgctcc
gaagataccaatttcatcaatatcgatcaccatctcggcaatgacaaattcggtgttgaa
aactgggttgaccacacccagcctgccgccgggtccatggttgccctgctcgcccaagaa
ttgaatgtcccattgaccggtcctctggccgaaaatatttatctggctgtagccaccgac
accgggttcttcacctatggctctactacgccggaatctctggaacttgcggccaatatg
cttcgtgacggactcaatatcgcccgcatgaatatggacataaccaaacaatggtctgaa
aacagaatgcgcttgtggaccgaggccatgaataacgtagagctgaccgacgacaaactg
gtcgcgacaaccgttatcacaaaagaaatgttcaagcggacaggcactacttctgcggat
actgaaaacatcatcaatttcctccgccgactcaaaaccgtacgagtcgccgtcaccttt
cgagaagaagacgtgaacacctacaaattttctctgcgctcctatggcgaagacaacgtt
caggaagtcgctgcccaattcggtggcggtggacacaaaaatgcatccggcggcaccatc
acagcgccactcgcccaagccaaagccatgcttatttccgctattggcgaatctctgagg
atcaaataa
DBGET
integrated database retrieval system
