Pseudodesulfovibrio nedwellii: SYK_00560
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Entry
SYK_00560 CDS
T09024
Name
(GenBank) flagellar hook-associated protein FlgK
KO
K02396
flagellar hook-associated protein 1
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SYK_00560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pnw02035
]
SYK_00560
Bacterial motility proteins [BR:
pnw02035
]
Flagellar system
Flagellar assembly proteins
Rod and hook
SYK_00560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FlgK_D1
Flg_bbr_C
Flg_bb_rod
Flagellin_C
DUF4352
CBM_6
DUF724
Motif
Other DBs
NCBI-ProteinID:
BDQ35696
UniProt:
A0ABN6RXK7
LinkDB
All DBs
Position
56606..58744
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AA seq
712 aa
AA seq
DB search
MSFGANSILDMGRWALFASQTQLQVTGQNIANVNTEGYSRRSVVLEEGQYIDYSPGQLGT
GVVAKEVVRHFDDMVEAMYLQQSSLTDKWGNLWEQLKSVENLLNESSGSGVSDSLSKYFN
SWNEVSQRPDNYGARQTVLNDTATLISTLKQVDTDLTLMQERINNDVSAQVDEANKLMEE
IASLNKEIQVHNIEGQNNANSLFDERARKVRDLAKLVDVKTIDNGGGEFTVLTQAGQTLV
DGESHFSLEFNSAVKTEDLRPDSTFAGNVYFDGNDDYEYTIEFVASSSGSNLAGQVSSGS
NAAQFKVSLDGGVTWLANEDGSERHFAARDYDSRVNVEGLQIWFGSDTNSKGAPAGTFQK
GDRYIISPHQGLYWVQNTSNVEEITPQQHFNGEENSRRLTGGSIAALLTFRDTYVGKYRS
KLDELARTVVWETNRRHSQGAGLQTFTTLDGTYRVDYTDKALASDSTGLAFGDKLQSGSS
FVYVYDESTGLLASSAALDFDGNGGTFNPAIHTLEDVVTAFDNTYGGRINASIVNNKIRL
EAADGYSFAFGTDSAGLYAALGINTFLKGETPKDMLINEKVSGDLDYLATGHVNGSGEMN
AGDNTTALSMYKLREAQVTMHTAHEGATTQSILDYYNGIVGNVGSDTNRAEFNKNFFGTL
SNDLNERQQQVSGVNLDEEMSDLVKYQASYTAAAKLISTADQMLQTILSLKP
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttggtgccaattccattctcgacatgggccggtgggctttgtttgcatcgcag
actcagcttcaagttactggtcagaatatcgccaacgtcaataccgaagggtattcacgt
cggtctgtcgtgttggaagaaggccagtatatcgattattcccccggtcagcttggaacc
ggtgtggttgccaaggaagtcgtccgacatttcgatgacatggttgaggctatgtatctt
cagcagtcttctctcacagacaagtggggcaacctgtgggaacagctcaagtccgtggaa
aacttgctcaatgaatccagtggatcgggtgtcagtgattccctgtcaaaatatttcaat
tcatggaacgaagtctcccaacgtcctgataattatggcgcacggcagaccgtactgaat
gataccgccacattgatttctaccttgaagcaggtggataccgatctcacgttgatgcag
gaacgcatcaataatgacgtatccgcccaggtcgacgaggccaataagctcatggaagag
attgcctctctcaacaaggagattcaggtccacaacattgaggggcagaacaatgccaac
tccctgtttgatgaacgggctagaaaggttcgcgatctggccaagctggtggacgtcaaa
actatcgataatggtggcggagagtttacagtcctgacccaggccgggcagactctggtc
gatggcgaaagccatttctctttggagttcaattccgcagtcaagacagaggatttgcgt
cccgattctacttttgcaggcaatgtgtatttcgatggcaatgatgactacgaatataca
attgaattcgtggcttccagttccggttccaacttggctggtcaggtatcgagcgggagt
aatgccgcacaattcaaggtttctcttgatggtggtgtgacatggttggccaatgaagat
ggcagtgaacgccattttgctgctcgtgattatgacagtcgtgttaatgtggaagggctt
cagatctggttcggttccgacaccaattcaaagggtgcgcctgcaggaacgttccagaag
ggtgatcgatatattatcagtccgcatcaggggctgtactgggtgcagaatacatccaat
gtggaagaaatcactccgcagcagcattttaacggtgaagaaaattctcgtcgtctgact
ggcggttccattgcggcacttttgactttccgtgatacctacgttggtaagtaccgttcc
aagctggacgaactggcccggaccgttgtgtgggaaacgaaccgcaggcacagtcagggt
gctggccttcagactttcacgaccctcgatggaacgtatcgggtggattacacggacaag
gctttggcgagtgattctactggccttgcttttggcgacaagctccagtccggcagttct
ttcgtgtatgtttatgatgaatccaccggattgttggcttcttccgcagcgcttgatttt
gatggcaacggaggtacgttcaacccggctattcacacattggaagatgtagtgacggcc
ttcgacaacacgtatggcggcaggattaatgcctccattgtcaacaacaagattcgtttg
gaagctgcagacggatactccttcgcattcggtactgattcagctggattatatgcggcc
cttggcatcaatacattccttaaaggcgaaacgcccaaggatatgctgataaatgaaaag
gtgtcgggtgatcttgattatctggcgactgggcatgtcaacggttctggcgagatgaat
gccggtgataacactacagctttgtccatgtataaattgcgggaagcgcaagtgaccatg
cacaccgcccatgaaggggcaaccactcagtccattctggattattacaacggtattgtg
ggtaatgttggttctgataccaatagggcagaattcaacaagaatttttttggcactttg
tccaatgatttgaatgagcggcagcagcaggtttcaggtgtgaacctggatgaggaaatg
agcgacctcgtcaagtaccaggcttcatacacagcggctgccaagcttatctccacggct
gatcagatgctgcaaacgattttgtcactcaagccgtaa
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