Pseudodesulfovibrio nedwellii: SYK_01960
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Entry
SYK_01960 CDS
T09024
Symbol
relA
Name
(GenBank) GTP pyrophosphokinase
KO
K01139
GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:
2.7.6.5
3.1.7.2
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00230
Purine metabolism
pnw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
SYK_01960 (relA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pnw03009
]
SYK_01960 (relA)
Enzymes [BR:
pnw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.6 Diphosphotransferases
2.7.6.5 GTP diphosphokinase
SYK_01960 (relA)
3. Hydrolases
3.1 Acting on ester bonds
3.1.7 Diphosphoric-monoester hydrolases
3.1.7.2 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
SYK_01960 (relA)
Ribosome biogenesis [BR:
pnw03009
]
Prokaryotic type
Other maturation factors
SYK_01960 (relA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD_4
RelA_SpoT
TGS
ACT_4
RelA_AH_RIS
HD
ACT
ACT_AHAS_ss
ThiS
bHLH-TF_ACT-like_plant
DEK_C
SusE
ACT_ACR9_3rd
Motif
Other DBs
NCBI-ProteinID:
BDQ35836
LinkDB
All DBs
Position
219866..222034
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AA seq
722 aa
AA seq
DB search
MIRINQITDKVASYIDNPDLDLIQRAYVFSAQAHDGVVRRSGEPYISHPMNVANLLADMQ
LDEATVAAGLLHDTVEDTDTTVDEIEDLFGADVADIVDGVTKISKMDFESKAVQQAENIR
KLILAMAEDIRVLMVKLADRLHNMRTLEFMKPVKQRLIAQETQDIYAPLANRLGLHRVKT
ELEDLCLRYLKPDVFSQLSEAVSEHRAAGEPYIEKVIELINEMLKKNKMKGVVNGRTKHL
HSIHVKMEQQGLTFDEIYDLIAFRIILKSLKDCYAVLGLIHAVWRPVAGRFKDYISIPKA
NMYQSLHSTVIGPDGERIEFQIRTDEMNQIAEYGVAAHWQYKEVGKGGKKGRATGTRDAE
RYTWLKQIMDWQRELSDPREFMSSLRLEMFQEEVYVFTPNGDIKELPDGATPVDFAYAIH
SEVGDKCAGAKINGRIVPLHTALKNGDSVEVITDKNRMPSRDWLKFVKTAKARTRIKQYI
RTVERERSIALAKELLEKEGRRVGINVQKAMKDGEFLKLAEEFNCGSVDDLLSQVGFSRF
TPRKVVKRLYALMNGETLDERKVKDKAVEEGGKKKPKTDGLQISGVDNVLVRFASCCTPL
PGEPIIGYITRGRGVTVHRIDCHNVKNFEDERLLQVTWEGVDEKPYPAKIKIKCLNKPGM
LGKICSMLAEMEVNIDSGNFESNVDGTSKLHFTVEVKDLNQLYSALAQVKKLKAVQEALR
VS
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcatcaaccagatcaccgacaaggtggcctcatacattgacaatcccgacctg
gatttgattcagcgggcgtatgtcttttctgcgcaggcccatgacggtgtggtgcgccgt
tccggtgaaccgtatatatcccatcctatgaatgtggctaatttgttggctgacatgcag
cttgatgaagccactgtggccgcggggcttttgcatgataccgtggaggataccgatacc
actgtcgatgagatcgaagatctgttcggtgcggatgtggctgatattgtggatggtgtc
accaagatcagtaagatggactttgagtccaaggctgttcagcaggcagaaaatattcgt
aagctcattctggctatggccgaggatatccgggtgctcatggtcaaattggctgacaga
ctgcataatatgcgcactctggagtttatgaagccggtcaagcagcggctcatagctcag
gaaacccaggatatttatgcaccgcttgccaaccgtcttggtttgcaccgggtcaagacc
gagctggaagatttgtgtctgcgatatctcaagccagatgttttttctcagctcagtgaa
gctgtctctgaacatcgtgccgctggtgaaccgtatatcgagaaagttattgagctgatc
aatgaaatgctcaaaaaaaacaagatgaagggcgtggtcaacggtcggacaaaacatttg
cattccatccacgtaaagatggaacagcagggactgacatttgacgaaatttatgacctg
attgcattccgtatcattttgaagtccttgaaggactgttatgctgttcttggacttatc
catgcggtgtggcgacctgtggcgggtcgttttaaagattatatttccatccccaaggcg
aatatgtaccagtcgcttcattccacggtcattgggccggatggggagcgcattgagttt
cagattcgtactgatgagatgaaccagattgccgaatatggtgtggccgctcattggcag
tacaaggaagttggtaaaggcggcaagaagggcagggcaaccggaacgcgtgatgcggag
cggtatacttggctcaagcagattatggattggcagcgggagctgtccgatccccgtgaa
ttcatgtcttccctgcgtttggaaatgtttcaggaagaagtgtacgtttttacgcctaac
ggtgacatcaaggaattaccggacggagctacgcctgtggatttcgcatatgccattcac
tccgaggtgggtgataagtgtgccggagccaagatcaatggccggatcgtaccgctgcat
accgcgctcaagaatggtgattccgttgaggtcatcactgacaagaatcggatgccgagc
cgagattggctcaagtttgtcaagacggccaaggcacggactcgtatcaagcaatatatt
cgtaccgtggagcgagaacggtccatcgctcttgccaaggagttgcttgagaaggaaggt
cgtcgggtcggcattaacgtgcagaaggcgatgaaggacggtgagtttctcaagctggct
gaggaattcaactgtgggagtgtggatgatcttttaagtcaggtcggcttttcccgtttt
acgcctcgcaaggttgtgaagcgtttgtatgcgcttatgaacggcgagacgctggacgaa
cgtaaggtcaaggataaggctgttgaagaagggggcaagaagaagcccaagaccgatggt
ctacaaatttctggcgtggacaatgtgcttgttcgttttgccagttgttgcactcctttg
ccgggtgaacctattattggctacatcacccgggggcgtggtgtgaccgtgcaccgtatt
gattgccacaatgtcaagaattttgaagatgaacgtttgttgcaagtcacttgggaaggc
gttgacgagaaaccttatccggccaagattaagatcaagtgtcttaataagcccggtatg
cttggcaagatatgctccatgttggctgagatggaggtcaacattgactccggtaatttc
gaatctaatgtggatggaacgtccaagttgcattttacggtggaggtcaaagacctcaat
caattgtattccgcattggcgcaggtcaagaagctcaaggccgtgcaagaggctttgcgt
gtttcctga
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