Pseudodesulfovibrio nedwellii: SYK_02230
Help
Entry
SYK_02230 CDS
T09024
Name
(GenBank) colicin receptor
KO
K16087
hemoglobin/transferrin/lactoferrin receptor protein
Organism
pnw
Pseudodesulfovibrio nedwellii
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnw02000
]
SYK_02230
Transporters [BR:
pnw02000
]
Other transporters
Pores ion channels [TC:
1
]
SYK_02230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
BDQ35863
LinkDB
All DBs
Position
complement(251865..253862)
Genome browser
AA seq
665 aa
AA seq
DB search
MKRHFGTLIFTLLLVAGIASMAHAEEVTLDKVIVSARGSDRLQSQTPGGTGVVEKEEIIL
APTASIADSISRISGLTKTGDSPWGQDVSIRGLTGSSVVVLIDGMRINTATEINARLGFI
NPMDVERVEVLKGPVSSLYGSGSTGGVINVITKKGKFTSESDVSGEAILNWSTNPQGPDG
YGRAVLSLKDLWIQASMGIRDHESFYGGDGTRISNSQYEDVYLRLAGEKKWSDLLTTRFQ
AMNIEANNIGIPGGSATMPQNAAITYPRSKNSLVSLDTVFTPKSDVVQEVLFNLYYTKND
RRVRIDKPAPPIAYVSPMADHETFGGKIQGEFGIGNHNIVTGLDAWNWHMVSKRAKHLVA
GPVIKDKPTPTSTMLSMGIFAEDDWKLNEAFTLNLGARLDRIEVSNKANAIYDKGTEEDL
GWNIHTGLTWTPAKNWSHTVIVASSYRAADILERFKNINLAPGIISRGNPNLDPETSYYF
EYGLHYTTNTLSVTGAAYINYINNYIEEKQKTAALYEMENVGKARIYGLEMDANWRFAEH
WDLYGNIAFANGRDLENKEALRSVAPINGLGGIRYTMGNGFWARLETPWALRQSEVPHGT
ERSDGWITCNTAAGYDFTMGKIDNSVSLSVNNIFDKKYQNYLANSRGVELLEPGISAAIN
YQIAF
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgacattttggcacgctcatcttcaccctgcttctcgtcgcgggcattgcctcg
atggctcacgccgaagaggtcacgctggacaaagttattgtctcggcgcgaggttccgac
agattgcaatcacaaactcccggcggcacaggagttgtggaaaaagaagaaatcatcctt
gcccccacagcaagtatcgcagactcgatttcccgcatttccggcctgacgaaaaccgga
gattctccttggggccaggacgtcagcattcgcggcttgacgggctcctcagttgtggtc
ctcattgatggaatgagaattaacacggccacggaaatcaatgcccgtctcggcttcatc
aaccccatggatgtcgaacgagtggaagtcctcaaaggccccgtcagctcactgtatggt
tccgggtccactggcggtgtcatcaatgtcatcaccaaaaaaggaaaattcacttcagaa
agcgacgtgtcaggtgaagccatcctcaactggtcaaccaaccctcaaggacctgatgga
tacggccgtgctgtccttagtctgaaagacttgtggattcaagcttccatgggcattcgc
gaccacgagagcttttatggaggtgacggcacccgaatctcaaacagtcaatacgaagat
gtttacctgcgactcgcgggcgagaaaaaatggtcagacctcctcaccactcgattccaa
gccatgaacattgaggccaacaacataggtatcccaggtggttctgccaccatgccccag
aacgcagccattacctatccccgttcaaaaaacagtctcgtcagtctggacacagtgttc
acaccaaaatcagatgtggtgcaggaagtgctgttcaacctctattacacaaaaaatgac
cgcagagttcggatcgacaaaccggcaccacctatcgcctacgtctcccccatggctgac
cacgaaacatttggtggaaaaattcagggagaattcggaataggcaatcataatattgtt
accggtcttgatgcctggaattggcacatggtctcgaaacgggcaaaacatctggtcgct
ggaccagtcataaaggataaacccacgccaacatcgaccatgttatccatgggcattttt
gccgaagatgattggaaacttaacgaggccttcactctcaatctgggtgcacgattagat
cgcattgaagtgtccaacaaggccaatgccatttatgacaagggaactgaagaggacctc
ggctggaacatccacacaggattgacatggacgcctgccaaaaactggtctcacactgtc
atagttgccagcagttatcgagccgcagacattcttgagcgcttcaaaaacatcaatctt
gcccccggcatcatttcacgcggcaacccaaatctggatcccgagacttcatactacttt
gagtatggactacattacacaacaaacactttgagtgtcacaggggcagcatacataaat
tatataaacaactacattgaagaaaaacagaaaacggccgcattgtatgaaatggaaaat
gtgggaaaagctcgcatatacggactcgaaatggatgcaaactggcgatttgccgaacac
tgggatctctacggcaacatagcctttgccaacgggcgtgaccttgaaaacaaagaagct
ttgcgaagcgtagcccccatcaatggtctcggtggtatccggtataccatggggaatgga
ttctgggctcgcctggaaacaccatgggcgcttcgtcaaagtgaagttccccatgggacc
gaacgctctgacggttggataacgtgcaacaccgccgccggctacgattttacgatgggt
aaaatcgacaacagcgtttcactttcggtgaacaatatcttcgacaaaaaatatcagaac
taccttgccaactcacgtggggttgaacttcttgaacctggcatcagtgccgcaatcaac
taccaaatcgcattctag
DBGET
integrated database retrieval system
