Pseudodesulfovibrio nedwellii: SYK_02270
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Entry
SYK_02270 CDS
T09024
Name
(GenBank) hypothetical protein
KO
K05372
AraC family transcriptional regulator
Organism
pnw
Pseudodesulfovibrio nedwellii
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnw03000
]
SYK_02270
Transcription factors [BR:
pnw03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SYK_02270
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
BDQ35867
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All DBs
Position
complement(256359..257333)
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AA seq
324 aa
AA seq
DB search
MQMKVTTAHADPCMRQIANTNSPFLNANMDAPVNAYLLRPDMAVCFWECTTNTPKEYTIT
FDTPVLRFSFILEGESISSADEQKDFARHKELIEMRFFHANSGQIRLAAHQSHKWLDIVL
SPSFLDLALPEESAHLPESIRKVVLEEVAHIPCDSRRMTPDQFVAATQLAHCPYTHAART
LFLKSKTLELLSHVLAVHSPTPCQTRLSSYEMECLKTAKDILIADVENPPTLKELSIMVG
LNETKLKTGFKALFGQTVYGYFKTYRIELARQRLLDETCSISQVASSVGYTNISHFSAAF
KERHGVTPSRYRKDNFFVANFSQK
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgaaagtcaccactgcccatgcagatccttgtatgcgccaaattgcgaacaca
aactcacctttccttaacgcgaacatggatgcaccagtcaatgcctatttacttcggccg
gatatggccgtttgcttctgggaatgcacaaccaacacccccaaagaatacacaatcacc
tttgacacacccgtcctgcggttttccttcattttagaaggtgaaagcatttcaagcgct
gacgaacaaaaagatttcgcccgtcacaaagaactgattgaaatgcgttttttccatgcg
aactccggccagataaggctagctgctcatcaatcgcataaatggctggatattgttctc
tctccctccttcctggacttggcccttcccgaagagagtgcgcacctgccagaaagtatc
cgcaaggtggtcttagaagaagtcgcccacatcccctgcgacagccgccgaatgacgcct
gatcaattcgtagctgccacacaactcgctcactgcccgtacacacatgccgcccgtact
ttgttcctcaaaagcaaaactcttgagcttctctctcatgtcctcgcagtgcattccccc
acgccatgtcaaacacgtttaagttcctacgaaatggaatgcctgaaaaccgccaaggac
atacttattgctgacgtagaaaatcctccgaccctcaaggaattgtccatcatggtagga
ttaaacgagaccaaactcaaaaccggattcaaagcactcttcggccagaccgtttatggt
tatttcaaaacatatcgaatagaactggctcgccaacgcctcctcgacgaaacttgctcc
attagccaagtggcgagtagcgtcggatacacgaacatcagtcatttcagcgcagcattc
aaggaacgtcatggagtaaccccgtcccgctatagaaaagacaacttctttgtcgccaat
ttctcccaaaagtag
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