Pseudodesulfovibrio nedwellii: SYK_04490
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Entry
SYK_04490 CDS
T09024
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SYK_04490 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnw03400
]
SYK_04490 (recO)
DNA repair and recombination proteins [BR:
pnw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SYK_04490 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SYK_04490 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Sterol_MT_C
Motif
Other DBs
NCBI-ProteinID:
BDQ36089
UniProt:
A0ABN6RZG3
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Position
485097..485855
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AA seq
252 aa
AA seq
DB search
MSSTEKALVLKVGRFREADCWVKLLTPGRGIFNAFAFGGSRSRRRFVGCLDPLSLVLFTI
GTNKTGTYTVLEEGSLLHNFPAIREDPTRTGLAVNCIKFIEAVEIDPSDARPVYELLLET
LHMLEKGGGSSDFTPWLFRAKLAFEMGFHPDFLSCGICGQSVVSLDGCHFGIEGGQVACR
TCLSGGKPLEGLARPVSTGVLRAFDWIQHSRPLDWLTVSMNNEVRRQTSQLIELFVAYHL
GLSWDNGMYKKV
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgagctccactgaaaaagctctagtactcaaggtggggcgttttcgggaggcagattgc
tgggttaaacttctcacgcccggacgtggcatttttaatgcctttgcctttggcgggtcc
cgtagtcgtcgtcgattcgttgggtgccttgatcctttaagccttgttttatttacgatt
ggaaccaacaagaccgggacatatacggttcttgaagaaggttccctgcttcataatttc
cctgcaattcgtgaagatcccaccagaactggccttgctgtcaattgtatcaaatttatt
gaagccgtggaaatcgatccgtctgatgctcgtcctgtgtatgagcttttgttggaaacg
ctccatatgctggaaaagggtggtggaagcagcgattttactccatggttgtttcgtgcg
aaattggcctttgaaatggggtttcatccggatttcctttcctgcggaatatgtggtcaa
tctgttgtttctcttgatggttgccatttcggaattgaaggggggcaagtggcctgccgg
acttgtctttcaggcgggaaaccgttagagggacttgctcggccagtttccaccggggtg
cttcgtgcttttgattggattcaacatagtcgtcctttggattggctgactgtatccatg
aataatgaagtccggcggcaaacgagtcaattgatcgagcttttcgttgcgtatcacctg
ggcctgtcctgggataatggcatgtataaaaaggtatga
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