Pseudodesulfovibrio nedwellii: SYK_04910
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Entry
SYK_04910 CDS
T09024
Symbol
sucCD
Name
(GenBank) succinate--CoA ligase [ADP-forming] subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00020
Citrate cycle (TCA cycle)
pnw00640
Propanoate metabolism
pnw00660
C5-Branched dibasic acid metabolism
pnw00720
Other carbon fixation pathways
pnw01100
Metabolic pathways
pnw01110
Biosynthesis of secondary metabolites
pnw01120
Microbial metabolism in diverse environments
pnw01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SYK_04910 (sucCD)
00640 Propanoate metabolism
SYK_04910 (sucCD)
00660 C5-Branched dibasic acid metabolism
SYK_04910 (sucCD)
09102 Energy metabolism
00720 Other carbon fixation pathways
SYK_04910 (sucCD)
Enzymes [BR:
pnw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
SYK_04910 (sucCD)
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Motif
Pfam:
Ligase_CoA
ATP-grasp_2
CoA_binding
Succ_CoA_lig
Citrate_synth_N
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
BDQ36131
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Position
complement(526707..528785)
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AA seq
692 aa
AA seq
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MLLNEHKSKILFKKAGVPTPEGIAVLPGEEDNFKPDFPLPWFLKSQVLTGGRGKAGGILR
IDSAEDFPATARTLFALNIKGHSVPFIRVEPGAEIAREFYISLTVSREHKCILLTVGREG
GVEIENLGADNLLVQKIKLPGGLAPHQIRAAFFHLGLKKEQLKDFAALLTSLFTGMLNNG
LLMAEINPLIITPENQFIALDGKVEIDDNHADIDPEMEAYYQREHATPEENEARDAGLSF
VKLPGWVGLMVNGAGLAMATMDLLNFSKLPASNFLDLGGAADQKRMKTALELLFGDNQVK
AIFINLFGGILSCEKVALAMKGALKGNAPKKPIVARMSGKDAKSGLEILKSLNVDGLHMA
GDMKEAIDILTTLKPADVQVIDFPAPMDCPAGQTPKPVSYTNDAVFGIDKDTPILVQGIT
GREGQLHTRLMQEYGANVVAGVTPFKGGQEVLGVPVYNSIAEAKRSHEIGASIIFVPPKM
AADAVYEAASNDIPWAICITEGIVQHDMLSTFEQIKDSRTRVVGPNTPGIIVPGKTKIGI
LPTTPFIPGPVAVLSRSGTLTYEVADRLTSAGIGQSLCVGIGGDPFIGVNFVDMFEMIRN
HDKTKAVVVLGEIGGQAEENLAEYVIKSGFDKPVISFIAGQTAPPGKRLGHAGAILEKGG
GIKSKLETMSKAGFAICPSLEAVAKMTAKALK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttaatgaacacaagagcaaaattcttttcaagaaagccggagtccccactccc
gagggtattgctgtcctcccaggcgaagaagacaacttcaagccagactttcccctaccg
tggttcctgaaatcacaagtacttaccggaggacgaggtaaagctggcggtattctgcgc
attgactccgccgaggacttccccgcaaccgcacgcactcttttcgccctaaacataaag
ggccattccgtaccgtttatccgtgtcgaacccggcgcggaaatcgctcgtgaattctac
atctcattgacagtatcccgtgaacacaaatgcattctgctcaccgtgggacgtgaaggt
ggcgtggaaatcgaaaatctcggcgcagacaatctgctcgttcaaaaaatcaaactcccc
ggcggactagctcctcatcaaatcagggccgctttctttcatctggggcttaaaaaagaa
cagctcaaagatttcgcagcattactgacaagccttttcacgggaatgctcaacaacgga
ctgcttatggccgagatcaaccccctgatcattacccctgagaatcagttcatcgcattg
gacggcaaggttgaaatcgacgacaaccatgctgacattgatcctgaaatggaagcttac
taccaacgcgaacacgccacgccggaagaaaatgaagcccgcgacgcaggcctctctttc
gtcaaacttcctggctgggtcggcctaatggtcaacggtgcaggactggccatggcaacc
atggatttgctgaacttttccaaactacctgccagcaacttcttggacctaggtggagct
gctgatcaaaagcgcatgaaaacggcactggaactactttttggcgacaatcaggtcaaa
gctatttttatcaaccttttcggaggaatactctcctgtgaaaaagttgccctcgccatg
aaaggtgccctcaaggggaacgccccgaaaaagcccatcgtggctcgaatgtctggcaag
gacgccaagtctggtttggaaattctcaaaagccttaatgtggacggcctgcacatggcc
ggagatatgaaagaggctatcgatattctaaccacactcaagcctgcggatgtacaagtt
attgattttccggcccctatggattgtccagcgggccaaacaccgaaaccagtcagttat
accaatgacgccgtattcggtatcgacaaagacacccccattctggttcagggtattact
ggtcgcgaaggccaacttcatacacgcctcatgcaggaatatggagcaaatgtggtagct
ggtgtcaccccattcaaaggtggacaggaagtactcggcgtaccggtgtacaactccatc
gccgaggcaaaacgttcacatgagatcggcgcaagcatcatctttgtcccccccaaaatg
gccgcagacgccgtttacgaagcagcgtccaatgacattccttgggccatctgcatcact
gaaggcattgtacaacacgacatgctttccacattcgaacaaattaaagactcccgaact
cgagttgtcgggccgaatacaccgggcataattgttcccggcaaaaccaaaatcggcatt
ctgcccacgacgcctttcattcccggtcctgtagccgtactctcccgcagtggcaccctg
acctatgaagtcgcggatcgtctgacttcagctggcattgggcaatctctttgtgtcggt
attggtggcgacccatttattggtgtcaatttcgttgatatgtttgaaatgattcgcaat
catgataagacaaaggctgtagttgttcttggagaaatcggcggtcaggccgaagaaaat
ctggcagaatacgtcataaaatccggatttgacaaacccgtcatatcttttatcgcagga
cagacagcccctcccggcaaacgattgggccacgccggcgccattcttgaaaaaggcggt
ggtatcaagagcaaactcgaaaccatgagtaaagctggattcgctatctgcccgagcctt
gaggccgttgcaaaaatgactgccaaggcactgaagtaa
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