Pseudodesulfovibrio nedwellii: SYK_05250
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Entry
SYK_05250 CDS
T09024
Name
(GenBank) LPS export ABC transporter permease LptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SYK_05250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnw02000
]
SYK_05250
Transporters [BR:
pnw02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
SYK_05250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
BDQ36165
UniProt:
A0ABM8AXJ7
LinkDB
All DBs
Position
563997..565163
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AA seq
388 aa
AA seq
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MQILHRQIFRELLKLFGLTVSCLLGLILIGRMLQLRSLFLSQDIGFFNILQLFFYLTPFF
LLLITPIATMLSVFLTFLRMSTDNELTALKANGVSLYKMLPAPLAFCTLCTLFTLFISSW
GLAWGMDMFKTKLYQFARTHSKFALQPGVFNKEFPGITFYAHQVDNEKGELKFAFVRDES
IKGTSVVVVAPEAQIESTAATAEIRITFKNGNIFRKSGEELNILKFGTYAIRLDLGKLLM
GFNFNEDKAKDMPLSRLSAIRSDHNEAPGRGDRFYRKVNTEYFKRITLPIGCLVLGMFAI
PIASAFRGLKQQYGLLLSMGLFLVYYTMFSVGVSMGESGAIPPAYGLWAPNFVYIFVALI
GMRYANKERMPTFVHWLMHLRFNKRASA
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaattcttcaccgacaaatatttcgtgaactactcaagctgtttggcttgactgtt
tcctgtcttttggggcttattctgattggcagaatgttacagttgcgttctttgttttta
tctcaggacattggtttttttaatatattgcagcttttcttctacctaacgccatttttt
ttgttgcttatcacgcctatcgccaccatgctgagcgtgtttttgacgtttttacgtatg
agtacggacaatgaattgaccgcactcaaggcgaatggggtcagtctttacaagatgtta
cctgcaccattggcgttttgtaccctgtgtactttatttaccttatttatttcatcctgg
gggcttgcatggggaatggacatgttcaagaccaaactttatcagtttgccaggacacat
tctaaatttgcattgcagccgggggtttttaacaaggaattccctggtattactttttat
gcgcatcaagtggacaatgagaaaggcgaattgaagtttgcttttgttcgtgacgagtct
attaaggggacttctgttgtggtcgtagcccctgaagcacagattgaatctacagccgcg
acagcggaaattcgaattacgtttaagaacggaaatatctttcgaaagagtggagaagaa
ctgaatatcctcaaatttggtacatatgccatcagacttgatcttggtaagttgctcatg
ggatttaattttaatgaagacaaggccaaggatatgccgttgtctcggttgagtgccatc
cgtagtgatcacaacgaagcgccgggtcgtggcgatcggttttatcgaaaagtgaacacc
gaatatttcaagcgtattacattgccgattggatgccttgtgcttggtatgtttgctatt
cccattgcttctgcctttcgtgggttgaagcagcaatatggtctgcttttgtccatgggg
ctgtttcttgtctattacacgatgttttctgttggtgtgagtatgggagagtctggggct
atccctccggcatatggcttgtgggcgcctaatttcgtttacatatttgtggccttgata
ggcatgcgctacgccaacaaagaacggatgcctacttttgttcattggcttatgcattta
cgattcaataagagggcgagcgcatga
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