Pseudodesulfovibrio nedwellii: SYK_05760
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Entry
SYK_05760 CDS
T09024
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SYK_05760 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnw03400
]
SYK_05760 (mutS)
DNA repair and recombination proteins [BR:
pnw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SYK_05760 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
AAA_14
AAA_22
nSTAND_NTPase5
AAA_27
Rad17
AAA_29
AAA_23
Motif
Other DBs
NCBI-ProteinID:
BDQ36216
UniProt:
A0ABN6S3G0
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Position
624211..626841
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AA seq
876 aa
AA seq
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MAKKKLTPMLEQYLRFKEENPGCLLFFRMGDFYELFFEDAEIVAKAVQITLTSRNPNDEN
PIPMCGMPHHSVEPYLSQLLDKGYKIAICDQVENPKEAVGLVKRDVTRVLTPGTVVEDSN
LKSKANNYLGALFWDETKDAGGIAWLDFSTGQWSGLHSRREVELWQWMIKINPSELLLPQ
GKKVPSQYNELSAQVTSVAPGAYFDLTASKNRVLEMQSVADFESLGLSGKNELTRACGAL
LTYLEQTQKGDFGHLGEFKPLNLSKHLLLDEITERNLEIFRRLDGKTGLGTLWHVLDRTM
TPMGGRLLEARLRQPWRQLSPIDKNLDCVTFFFERDQLRSDVRHALDSVYDLERLSTRIF
LGRANPKDFIALQKSLSMLPVLQSCLKEQELEAAPELRKIYRKWDGMDDLTALLESALVD
SPPPVITDGGLFKKGYDAVLDEFIELNEHGEDKLRKLHEKELSANDIPKLKLGFNKVFGY
FFEVSKAYKGQVPEHFIRRQTLVNSERYITPELKEMEDRILSASDERKSLEYKLFQDLRE
RLAKARDRFLFMADIVAALDYWQGLAEAARVNEWNRPLLHDGMEIEIKAGRHPVVEEAMG
ASNYIPGDLKMDKDRRILLITGPNMAGKSTVLRQVAILTIMAQIGSFVPAKSAQLGLADR
VFSRVGASDNLAQGHSTFMVEMTETARILRQATKRSLVILDEIGRGTSTYDGLSLAWAVV
EELSSRARGGIRTLFATHYHELTSLEGKIEGLRNLNIAVKEWKGDIVFLRRLVPGPADRS
YGIEVARLAGVPRGVVERAREILAKLEEKSQDNQSKGAVERASQTLLPGFGAPPIEIPEE
LVEHPIITQLVDLDVDGMTPIQALMLLNQWKDMIKE
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
gtggctaagaaaaaactgacgcctatgcttgagcagtaccttcgtttcaaggaggaaaat
ccaggctgccttcttttctttcgtatgggcgacttttatgagttgttcttcgaagatgct
gagattgtggccaaagctgttcaaattaccttgaccagtcgtaacccaaacgacgaaaat
cctatccctatgtgcggtatgccccatcattctgtggagccttatctgagtcaattactc
gacaagggttataagatcgccatctgtgatcaagtggaaaatcccaaagaagccgtaggg
ttggtgaaacgggatgtaacacgagtccttacgccgggaacggttgtcgaggattcaaac
ctcaagtccaaagcaaacaattatcttggtgcattgttttgggatgagaccaaagacgcg
ggcggtattgcttggctcgatttttctaccggccaatggtctgggctgcatagtcgccgt
gaggttgagctttggcagtggatgataaagattaatcccagtgagttacttctccctcaa
gggaaaaaggtgccatctcaatacaatgaattgagtgcacaggtcaccagtgttgcaccg
ggggcttattttgatctgacagcttcaaaaaacagagtgctagaaatgcagtctgttgca
gatttcgaaagtcttgggttgagtggtaaaaacgaattgacccgtgcctgtggtgcactt
ctgacttaccttgaacagacgcagaaaggcgatttcgggcacttgggtgaattcaagccg
ttgaatttgagtaaacatctgcttttggatgaaattaccgaacggaatctcgaaattttc
aggcgtcttgatgggaagactggacttggcaccctgtggcatgtgcttgatcggaccatg
actcccatggggggccggctgcttgaagcccgtttgcgtcagccttggcgacagctttct
cccattgataagaatctcgattgtgtcacgtttttctttgaacgcgatcaacttcgctct
gatgtccgacacgcattggattcagtctatgatttggaacgtctttccactcgcattttt
ttaggacgtgcaaatcctaaagattttattgcattacaaaaaagtctttcaatgttgccc
gttcttcaaagttgtctgaaagaacaggaacttgaagcagcccccgaattgcgtaaaatt
tatcgaaaatgggatggcatggatgacctgaccgccctgcttgaatcagcccttgtggac
agtcctccaccggtcatcacagatggcggattattcaagaaagggtatgatgccgttttg
gatgagtttattgagctgaatgaacacggtgaagataaactgaggaaattgcacgaaaaa
gaactgtctgccaacgatatacccaagctcaagcttggattcaacaaggtctttggttat
tttttcgaggtctcgaaggcatataaagggcaggtgcctgaacattttattcgtcgtcag
actttggtaaacagtgagcggtatattactcctgaacttaaggagatggaggaccgtatc
ctttcggcctccgatgaacgtaaaagtcttgagtacaagttatttcaggatttacgtgag
cgtcttgccaaggcaagggatcgttttttgtttatggccgacattgtggctgccctggat
tattggcaagggttggcagaagctgctcgtgtcaacgaatggaaccgccctcttcttcat
gatggtatggaaatcgagattaaggcaggacgccaccctgtagtggaagaagccatgggg
gcttccaattatattcccggcgatttgaagatggataaagatcgacgtatcctgctcatt
accggtccgaatatggcaggtaaatccacggtactcaggcaggtggctatcctgaccatt
atggcccagattggttcctttgttccagccaagtccgcacaactcgggttggcggatcgt
gttttttctcgtgtgggagcttcggataatctggcgcaaggacattccacatttatggtg
gaaatgactgaaactgctcgtattcttcgacaagcgactaaacgaagtctggttattttg
gatgaaatcggacgtggtaccagtacttatgatggcctttcactcgcttgggccgtggtc
gaagagctttcttctcgtgccagaggtggaattcgtaccttgttcgccactcattaccat
gaattgacgagtcttgaaggcaagattgaagggttgcgtaatctcaatatcgcggtcaag
gaatggaaaggcgacatcgtctttttacgtcgtcttgtgcctggtcctgctgacagaagt
tatggtatcgaagtggcccgactggctggagtacctcgtggtgtcgtggaacgagcgcga
gaaatccttgcgaagctcgaagaaaagtcgcaggataatcaatcgaaaggggctgttgag
cgggcatcgcagactttattgccgggatttggtgctcctcctattgaaattccggaggaa
ttggtcgaacatccgatcatcactcaactcgtggatctcgacgtggacggcatgacaccc
attcaggctttgatgttgcttaatcaatggaaggacatgatcaaggaatag
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