KEGG   Pseudodesulfovibrio nedwellii: SYK_05780
Entry
SYK_05780         CDS       T09024                                 
Symbol
lysA-1
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pnw  Pseudodesulfovibrio nedwellii
Pathway
pnw00300  Lysine biosynthesis
pnw00470  D-Amino acid metabolism
pnw01100  Metabolic pathways
pnw01110  Biosynthesis of secondary metabolites
pnw01120  Microbial metabolism in diverse environments
pnw01230  Biosynthesis of amino acids
Module
pnw_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pnw00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SYK_05780 (lysA-1)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SYK_05780 (lysA-1)
Enzymes [BR:pnw01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     SYK_05780 (lysA-1)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: BDQ36218
LinkDB
Position
627388..628626
AA seq 412 aa
MHHFEYRDGILSAEEVSVTALAEEYGTPLYIYSAATLRRHFKAFDSAFNELDHLTCYSIK
ANSNLAVLKLLAAEGAGMDIVSGGELYRALKAGVTPEKIVYSGVGKRDSEIREALEAGIL
MFNVESVAELKRINTVASDMGMTAKVSFRINPDVDPQTHPYISTGMQENKFGLDIENSLA
AYTLAAELENVEPVGMDCHIGSQLTKIDPFLEALDKLLDFNEKLKGLGINIKYLDLGGGL
GIPYDKEEPPHPSEFGKALSAKLKGLPLKVIFEPGRVIAGNAGIMVTQVVYTKSNPTKNF
LIVDAAMNDLIRPSLYGSYHRIGEVELKGRQHQRFDVVGPICESGDFLARDRELPTVDQG
ERLVVYSAGAYGFTMASNYNTRPRACELLVDGSNVTVARKRETYEDLIANEL
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgcatcattttgaataccgagacggaattttatccgctgaagaagtcagcgtcaccgcc
cttgcagaagaatatggtaccccactgtacatttattctgctgctacccttagacgccat
ttcaaagcttttgattctgcttttaatgagctggatcatttgacctgttattccatcaaa
gccaattcaaatttggcggttcttaaattgctggccgctgaaggcgctggcatggacatt
gtttccggcggtgaattgtatcgcgcactgaaagctggcgtcacccctgaaaagattgtt
tattccggcgtaggaaaacgtgattctgagattcgtgaagctcttgaagcgggaattctg
atgtttaacgtagaatccgtcgcggaacttaaaagaatcaatacggttgccagcgatatg
ggaatgacggccaaggtcagctttcggattaatccggatgtcgatccgcagactcatcca
tatatttcaacgggtatgcaggaaaataaatttggattggatatcgagaattcgctggct
gcctacacactggctgccgagttggagaatgttgaacccgtgggcatggattgtcatatt
ggttctcagctcacaaaaatcgatccgtttcttgaagctttagataaacttttggatttc
aacgaaaagctgaaaggacttggtattaatatcaagtaccttgatcttggtggtggactt
gggattccttatgacaaggaagaaccgccccatccttcggaatttggtaaagctttgagc
gcaaaactgaaaggtttgccgttgaaggtcatttttgaacctggacgtgtcattgcaggc
aatgccggtatcatggtgactcaggtggtttataccaagtccaaccccacaaagaatttc
ttgattgtggatgctgcaatgaatgatttgattcgtccgagcttatacggttcttatcat
cgtattggcgaagttgaacttaaaggccgtcaacatcaacgttttgatgtcgttggtccc
atttgtgagtccggtgacttcctggcccgagatcgtgagctgccgactgtggatcaagga
gagcgtctggtggtttattctgccggagcctatggatttaccatggcctcaaattataat
acccgtcctcgtgcctgcgagttgctggtggacggcagcaacgtgacagttgccagaaaa
cgggaaacatacgaagatcttatcgcaaatgaactttag

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