Pseudodesulfovibrio nedwellii: SYK_06250
Help
Entry
SYK_06250 CDS
T09024
Name
(GenBank) diaminopimelate aminotransferase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00300
Lysine biosynthesis
pnw01100
Metabolic pathways
pnw01120
Microbial metabolism in diverse environments
pnw01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SYK_06250
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pnw01002
]
SYK_06250
Enzymes [BR:
pnw01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
SYK_06250
Peptidases and inhibitors [BR:
pnw01002
]
Metallo peptidases
Family M20
SYK_06250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
BDQ36265
UniProt:
A0ABN6S3J7
LinkDB
All DBs
Position
674655..675878
Genome browser
AA seq
407 aa
AA seq
DB search
MDALFSELDKQSEAVVELQTKLTAIPALGPMNGGDGEKDKADFLIAHLKSMGIEDIREYN
APAKDVSCGYRPNVAAIIPGKNTEKTLWVISHIDIVPPGDLALWDTDPYTLVRDGDKIIG
RGVEDNQQGIVSSLLTAQALLDLKVTPEVNYGIIFVADEETGSGFGLEYLVKEHEEIFAK
DDLFLVPDFGEPTSEMVEVAEKSMFWLKVIVEGKQCHASTPYQGVNSLVAASDFILRIKE
LESIYDAENPIYDPPCSTFQPTMKEANVANINTLPGRDVFYIDSRVMPEYDVEEILKTIR
DFGSEVEKTHGVTISYETVQAEQAAPATPVDSEIAVKTIKSIKKIYNNNPRTVGVGGGTV
AAFLRRKEYQAVVWATLNHCAHQPNEWASIKNTINDAKVIGDILLSK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggatgctctcttttccgaactggacaaacagtctgaagcagttgtcgaactgcaaacc
aagcttactgctattcccgcccttggaccgatgaatggtggtgacggtgaaaaagacaaa
gctgactttctgatcgctcatcttaaatccatgggtattgaagatattcgcgagtataat
gccccagccaaggacgtttcctgcggttaccgtccaaacgttgcggcaatcatccccggt
aaaaatacggaaaagaccttgtgggtcatctcgcatatcgacatcgtccctccgggcgac
ttggctctgtgggatactgatccctacacgttagttcgtgatggagataaaatcattggg
cgaggcgttgaagacaatcagcagggtattgtttcttcgctcctgacggctcaagctttg
cttgatctaaaagttaccccagaagttaactacggtattatcttcgtggcagacgaagaa
accggcagcggctttggtttggaatatctggttaaggaacatgaagaaatattcgccaaa
gatgatcttttcctggttcccgactttggtgaaccgacttccgaaatggttgaagtcgca
gaaaagtccatgttttggctcaaggttattgttgagggcaagcagtgccacgcatctacc
ccatatcagggtgtgaactctttggttgctgcttcagactttattcttcgtattaaggaa
cttgaaagcatctacgatgccgagaaccctatttacgacccgccctgctccacgttccag
cccacaatgaaagaggcaaacgtggccaatatcaacactcttccaggccgtgatgttttt
tacattgatagccgcgtcatgcctgaatatgacgtcgaagaaatcctgaagactatccgt
gactttggttctgaagtggaaaaaacacatggcgtgaccatttcctatgagaccgttcag
gccgaacaggcagctcctgccacaccagtcgacagcgaaattgcggtcaagactattaaa
tccatcaaaaagatttataacaacaatcctcgtactgttggcgtcggcggtggtactgtt
gctgcattcctgcgccgtaaagaatatcaggccgttgtctgggccactttgaaccattgc
gcacaccagcccaatgagtgggcttctataaaaaatactatcaatgacgccaaagtcatt
ggtgatatcctcttgtctaaatag
DBGET
integrated database retrieval system
