Pseudodesulfovibrio nedwellii: SYK_06480
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Entry
SYK_06480 CDS
T09024
Name
(GenBank) hypothetical protein
KO
K03270
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:
3.1.3.45
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00541
Biosynthesis of various nucleotide sugars
pnw01100
Metabolic pathways
pnw01250
Biosynthesis of nucleotide sugars
Module
pnw_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SYK_06480
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pnw01005
]
SYK_06480
Enzymes [BR:
pnw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.45 3-deoxy-manno-octulosonate-8-phosphatase
SYK_06480
Lipopolysaccharide biosynthesis proteins [BR:
pnw01005
]
Lipid A
SYK_06480
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Gene cluster
GFIT
Motif
Pfam:
Hydrolase_3
Hydrolase
HAD_2
Motif
Other DBs
NCBI-ProteinID:
BDQ36288
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All DBs
Position
complement(694693..695220)
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AA seq
175 aa
AA seq
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MPDNTTKLAQNIKLLVLDVDGVLTDGGLYYGDDGIVMKRFHVQDGLGIKLAQAVGLEIGV
ITGLNQKPVEKRIRELGIAHYYAGKHDKAPLFEEICENVGVSLSEAAFMGDDWIDLGVMN
VAGLAMSVPNGVPEVIEAADWISTRKGGDGAVREAIAFILEARGLKDKALKQWAE
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgataacacgacgaagctcgcacaaaacatcaagctgcttgttctcgacgtggac
ggtgtcctcactgacggcggcctgtattatggtgacgacgggattgtcatgaaacgtttt
catgttcaagatggtctcggtataaaattggcacaagcagtaggcctcgaaataggtgtc
atcacaggattaaaccagaagcctgtcgaaaagcgtatccgagaattgggtattgcccat
tattatgctggaaagcacgacaaagcaccgctttttgaagagatatgcgaaaacgttggt
gtatctttgtctgaagccgcgtttatgggcgacgattggattgatcttggtgttatgaat
gtggccggattagccatgagtgtccccaatggtgtgcccgaagtcatagaggcagcagac
tggatttccactcgcaagggtggggacggagccgtcagagaagccatcgcgtttatcctt
gaagctcgtgggctcaaagataaagctttaaagcagtgggcagaatga
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