Pseudodesulfovibrio nedwellii: SYK_07300
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Entry
SYK_07300 CDS
T09024
Name
(GenBank) hypothetical protein
KO
K00125
formate dehydrogenase (coenzyme F420) beta subunit [EC:
1.17.98.3
1.8.98.6
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00680
Methane metabolism
pnw01100
Metabolic pathways
pnw01120
Microbial metabolism in diverse environments
pnw01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
SYK_07300
Enzymes [BR:
pnw01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.98 With other, known, physiological acceptors
1.8.98.6 formate:CoB-CoM heterodisulfide,ferredoxin reductase
SYK_07300
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.3 formate dehydrogenase (coenzyme F420)
SYK_07300
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Gene cluster
GFIT
Motif
Pfam:
Fer4_8
FrhB_FdhB_C
Fer4_17
Fer4_10
Fer4_9
Fer4
Fer4_2
Fer4_3
Fer4_7
Fer4_6
Fer4_21
Fer4_18
Fer4_4
Fer4_16
Motif
Other DBs
NCBI-ProteinID:
BDQ36370
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Position
complement(765680..766825)
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AA seq
381 aa
AA seq
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MATTVKIQVENNNPVVAIQGFLRGLLEDESLGGVVVPVHLFDKGLPMPTLVTDPDQLSGA
DPLAPAFPLNSAKLLSRLTRGQSGERIAVVMRPCEIRAFVELVKLNQGSLDDVIIVGMDC
MGAYDNTGYTTFVGDRESFEATLAFQGQHGGANETAVNGVDIAPACKSCEFPAPTNADIV
IGIAGADLHDAIPVMADSARGEALLNSLGLPNMETTGRDAVLESLIKVRTKNRDAMIEAT
KAATGTLTDLSEYLSSCVNCYNCRVACPVCYCKECVFNTDVFEHKPWQYMGWAKRKGSLK
LPTDTIFYHLTRMAHMSMACVGCGQCSNACPNGIPVMELFRTVAARTQKSFDYEPGRSLE
ESPPLSVFKEDEFQDTVSHMA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccactgtgaaaatacaggttgaaaataacaacccggttgtggcgatacaaggc
tttttgcgtggcttgttggaagacgagtcattaggcggagtcgtggtgccggttcatctg
tttgacaagggactccccatgccgacgttggtgactgaccctgatcagctttcaggtgcg
gaccctttggctccggcatttcccctgaacagtgcaaaacttctgtcgcgattgacgcgt
ggtcagtccggcgaacgtatagctgttgttatgcgcccctgtgaaattagggcattcgtg
gaattagtgaagctcaatcagggcagccttgatgatgtaattatcgtggggatggattgt
atgggggcctatgacaacactggctatacgacgttcgtcggtgaccgggagtcatttgag
gcaacacttgcatttcaaggacagcacggtggagcaaatgagacagctgtgaacggtgtg
gatatagctccggcctgcaagtcctgtgaattcccggctccgaccaatgcggatattgtt
attgggatcgccggtgcagatctgcacgatgctattccggtcatggcagatagtgctcga
ggcgaggctctgctcaatagccttgggttgcccaatatggaaaccactggacgagacgca
gtgcttgaatcgcttattaaggtgcgcactaaaaatcgtgatgccatgattgaggcgacc
aaggccgccactggtacattgaccgatttgtcagaatatctgtcgagttgcgtgaattgt
tataattgccgagtggcttgtccggtttgttactgcaaggaatgcgtttttaatactgac
gtgttcgaacataagccgtggcagtacatgggctgggccaagcgtaagggaagtctcaag
ctgcccacggatactatcttctatcatctgacccgtatggcgcatatgtccatggcctgt
gtgggatgtggacagtgttctaatgcttgtcctaacggcatccccgtaatggagttgttc
cgtacagtcgcagctcggacacagaagagctttgactacgagccgggcagaagtctggaa
gagtcgccgccgctttcggttttcaaggaagacgagttccaggacacagtgtcgcacatg
gcctaa
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