Pseudodesulfovibrio nedwellii: SYK_08010
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Entry
SYK_08010 CDS
T09024
Name
(GenBank) OMP85 family outer membrane protein
KO
K07277
outer membrane protein insertion porin family
Organism
pnw
Pseudodesulfovibrio nedwellii
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pnw03029
]
SYK_08010
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnw02000
]
SYK_08010
Mitochondrial biogenesis [BR:
pnw03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
SYK_08010
Transporters [BR:
pnw02000
]
Other transporters
Pores ion channels [TC:
1
]
SYK_08010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
POTRA_2
POTRA_1
ShlB
V_ATPase_I_N
Motif
Other DBs
NCBI-ProteinID:
BDQ36441
LinkDB
All DBs
Position
complement(839236..841953)
Genome browser
AA seq
905 aa
AA seq
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MLISLRRLAIGAIAACLLMVAGAAFAADGLNQDIKVTVLPFEVNAGDDLSYLKDSLPELL
TDRLHEAGFNVVDQAEVARIVGEKGYTQFTPTTAREISLLAGGEFSVYGSLNQIGESLTL
DARLVDAYAKGPGKKISVTKDGLINLLPAVDALVDRMRMDLLRQDVVAEVDVEGTQVLDK
EVVMMRLTMQKGDILTAKSVNTALKNIYDLGYFDDVQVKVDSVENGKKVIFDVKEKPRIQ
ALGVRGADKIDSEDILEALSTKKGGVVNPKVLADDIRVIREMYRKEGYYKAKVTHEVEDA
GKGVARLTFVIDEGPQLYIENIIIDGAKQMDPDDVKDILALKERGMFSWIDDSGVLKEEL
LERDAAAIMALYQSKGFLTAKVGRPDVEIKDDGIDVIYRVWEGDRFKMGQTLFKGDLIED
PSKLIEVTAIDALHDEDEYFDRTVLKRDIEALTVYYNNYGYAYADVGVNLQDNQESKVVD
VVYTISKHQRVHIRRVLIEGNTRTRDNVIMREMRLADGDQFSGDKLKRSNQRLTNLDFFE
KVDISPVPTGNPEEMDLVVKVKDKSTGKISGGIGYSTYDGVFFGGTIGESNLFGKGYQAS
FEGQIGGSKTSYVAKFINPRINDTDLGFGLQAHNTDTEYNQYDKDALGGNVYFFYPLGEY
TTLKWDYGLEKYNIKNVADDASDDVKDDAGYHLASTLSASVTRNTLDNYTSPTTGTKLLL
RMIFAGGPIGGTDDYVKYVGSHDWYMPAFEKVVFHTKFWAGYIHQNFGGEEIPTAPRFEL
GGVNSVRGYSNYDISPTEDSTSSSTVGGDKAFYTNIELKRPISEELGIMALVFFDAGNSW
KEEEMFFESVTRYGEKPSLGLYKSVGAGVNWNSPMGPVGLVYGYALDPLDDNGRHKIELL
MGQQF
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgctcattagtcttcgcagacttgccattggggcgattgcagcttgtttgttgatggtc
gctggtgcggcctttgctgctgatggtctcaatcaggatattaaggttaccgtattacct
ttcgaggttaatgccggtgacgatttgtcctatcttaaggacagcctccctgagcttttg
actgaccgtcttcatgaggctggttttaatgtcgttgatcaggctgaagttgctcgtatt
gtcggcgaaaaaggctatactcagtttactcccactacagcgcgtgagatttctttgttg
gccggtggtgaattttcagtttacggctctctgaatcaaataggagagagcctgactttg
gatgctcgtcttgtcgatgcatatgccaaaggtcctggtaagaaaatttctgtgaccaaa
gacggtcttatcaacctgctgcccgccgttgatgccttggtggaccgtatgcgtatggac
cttcttcgtcaggacgtggtggccgaagttgatgtcgagggaactcaggttcttgacaag
gaagtcgtcatgatgcgtcttactatgcagaaaggcgatatcctgacagccaagtcagtc
aatactgcgcttaaaaatatttatgatcttggttattttgatgatgttcaggttaaagtt
gattctgttgagaatggcaaaaaagtcatttttgatgtcaaggaaaagccacgtattcaa
gctcttggagtacgtggggccgataaaattgattccgaagatatccttgaagctctttcc
accaaaaagggtggcgttgttaaccctaaggttttagctgatgatattcgtgtcatccgt
gaaatgtaccggaaagaagggtattacaaagccaaggtcactcacgaggttgaagatgcc
gggaagggcgtggcccgtctgacttttgtcattgatgaaggtccgcagttatatattgaa
aacatcatcattgatggtgccaaacaaatggatccagatgatgtcaaagatatactggct
cttaaagaacgtggcatgttctcttggattgatgattcaggtgttttaaaagaagagctt
ttagagcgtgatgcagctgctatcatggcgttgtatcagagtaaggggttccttactgcc
aaagtcggacgtcctgatgttgaaatcaaggatgatggcattgatgttatttatcgtgtg
tgggaaggagatcgttttaaaatggggcagaccttgtttaaaggtgacctcattgaagat
ccttccaaacttattgaagtgactgctattgatgcgcttcatgatgaagatgaatatttt
gaccggactgtgctcaaaagagatattgaagcactgacagtttattataataattacgga
tacgcttacgctgatgtaggtgtaaatttacaggacaaccaagaaagcaaagttgttgat
gtcgtttataccatctccaaacatcaacgtgttcatattcgtcgtgtccttattgaagga
aatactcgtacccgtgacaacgttatcatgcgtgaaatgcgcttggctgatggcgatcag
ttcagtggcgataagttgaaacgatccaaccaacgcctgactaacctcgacttcttcgaa
aaagtcgacatttcaccggttccaactggcaaccctgaagagatggatttggtcgtcaag
gttaaggataaatctactggtaagatcagtggtggtataggttattcaacgtatgatggt
gtgttcttcggtggtaccattggtgagagtaacctcttcggtaaagggtatcaggctagt
tttgaagggcagatcggtggttctaagacatcatatgtggctaagtttattaatccgcgt
ataaatgacactgatcttggtttcggtctgcaggctcataatactgatacggaatacaat
cagtacgataaagatgccctcggtggtaatgtctatttcttctatcctcttggtgaatat
acaacgctcaagtgggattacggtttggaaaagtataatattaaaaatgtggcagatgat
gcttccgatgacgtaaaagacgatgccggataccatctcgcttctactctttctgcaagt
gttacccgtaacacccttgataattatacttcaccaaccactggaacaaagcttttgtta
cggatgatttttgccggtggtccaattggtggtactgatgattatgtgaaatatgtagga
tcacacgattggtatatgccagcctttgaaaaagtggtctttcatacgaagttttgggct
ggttatattcaccagaactttggtggagaagagattccgacagcaccacggtttgaattg
ggtggtgttaacagtgtgcgtggttacagcaactacgacatttctccgacagaagattcg
acttccagttcaaccgttggtggtgacaaagcattttataccaatattgaattgaagcgt
cccatcagtgaagaattgggtataatggcattagttttctttgatgctggtaactcttgg
aaggaagaggaaatgtttttcgagtccgttactcggtatggcgaaaaaccttccttgggc
ttgtataagagtgtgggcgctggtgttaactggaattcccccatgggtcctgttggcctt
gtgtacggctacgctttggacccacttgatgataacggtcgtcataagattgagttgctt
atgggacaacagttctaa
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