Pseudodesulfovibrio nedwellii: SYK_08610
Help
Entry
SYK_08610 CDS
T09024
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
pnw
Pseudodesulfovibrio nedwellii
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
SYK_08610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
HHH_9
S1
Tex_N
HHH_7
S1_RRP5
T2SSK
HHH
YqgF
HHH_6
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BDQ36501
LinkDB
All DBs
Position
900366..902402
Genome browser
AA seq
678 aa
AA seq
DB search
MPFISRYRKEATGTMDEVGVAGVRDRLIELAELDKRREAILSSLLERDLLSDELKRAINQ
AKDKARLEDIYLPHRPKRRTRAAMAKERGLESLANTLFSQRGIDPKREAERYINQNKDVA
DIEAALAGARDIIAENINENPKARAAMRTLFVKRGRFISQVAKGKEEAGATYRDWFDWDE
PLARIPGHRALAMFRGENEKLLKLSLRPPEEEATGLMRRSILRGKGEDSHEVGMALDDCY
KRLLGPSMENEVRAEVKKRADAEAIGVFAANLRELLLAAPLGQKRVLALDPGFRTGAKLT
VLDAQGALKEHTTIFPTGSKRQQEEAGATLQSLCSKHAVEAIAIGNGTAGRETETFVRGL
DLGLPAVLVNESGASIYSASEVARREFPDLDLTVRGSASIGRRLMDPLAELVKIDPKSIG
VGQYQHDVDQTALKKGLDDVVERCVNSVGVDLNTASRELLASVSGLGPVLAENIVNYRDK
NGPFTSRRELLKVKRLGPKAFEQAAGFLRVEGKEILDGSAVHPERYKLVKQMAKDAACSV
ADLINDATARERITIDNYIAEEVGLPTLRDIINELTKPGRDPRAEFSTFSFTEGINDIKD
LYEGMKLPGIVTNVTKFGAFVDIGVHRDGLVHISQLADKFIRDPSEVVAAGREVTVTVIG
VDEKRGRINLSMKTHTEA
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
gtgcctttcatttctcggtatcgtaaagaagcaaccggcaccatggatgaagtaggagtg
gccggagtccgcgacaggttaatcgaactcgcagagctggataaacgacgggaagcaatc
ctctcctctctacttgaaagagacctcctttccgatgagctcaaacgggctattaatcaa
gccaaagacaaagctcgactggaagatatctatctaccccatcgcccaaaacggcgaacg
cgtgcggccatggccaaagaacgagggctggaatctttggcaaacacacttttcagccaa
cgaggcatcgaccctaaacgtgaagctgaacggtatataaatcaaaacaaagacgtggcc
gacattgaagcggcactagccggagctcgggatatcattgctgaaaacatcaatgagaac
ccaaaagcgcgagcagccatgcgaaccctattcgtcaaacgtggccgatttatatctcag
gtagccaaaggcaaagaagaagccggagcaacctaccgagactggtttgactgggatgaa
ccgttggcacgtattcccggtcaccgagcacttgccatgtttcggggggaaaatgaaaag
ctgctcaaactctctttacgtccaccggaagaggaagccacagggctcatgcgcagatct
atcttgcgcggcaagggcgaagattcccacgaggtaggcatggctctcgatgattgttat
aaacgcttgctcggtccatccatggaaaacgaagtgcgggctgaagtcaaaaaacgggca
gacgctgaggctattggcgtctttgctgcgaatctacgagaattgttgctggctgctccg
cttgggcaaaaacgcgtactggctctcgaccccggatttcgtacaggggccaaactcaca
gtccttgacgctcaaggcgcactgaaagaacacacaaccatttttcccaccggatcaaaa
agacaacaggaagaagctggcgcaactcttcaatctttgtgttccaagcacgctgttgaa
gctattgccattggcaacggcacggctggacgcgaaacagaaacttttgtccgcggcctg
gaccttggtctccctgcggtgctggtcaacgagtccggagcttccatctactctgcttcg
gaagtcgcccgtcgagagtttcccgatcttgacctgaccgttcgtggttctgcttccatc
ggccgcaggcttatggacccactggccgaactggtcaagattgatcccaaatccattggt
gtaggccaatatcaacatgatgttgatcagacggctctcaaaaaaggcctcgacgacgtg
gtggaacgatgtgtcaactcggttggggtagacttgaatacggcaagtcgggaattactc
gcttccgtctctgggttaggacctgttctggctgaaaatatcgtcaattatcgcgacaag
aatggtccttttacctctcgacgagaactgctcaaggtcaaacgactcggcccaaaggcc
tttgaacaggccgccggatttctgcgcgtcgaaggcaaagaaattctggacggcagtgcg
gtccaccccgagcgatataaactcgtcaaacaaatggccaaggatgcagcctgctcagta
gcagacctaatcaatgatgcaacagcccgtgaacgaataacaatcgataattatatcgct
gaagaagtaggattgccgacgctacgagacatcataaatgaactcaccaaaccgggacga
gaccctcgagccgaattcagcacattttcattcaccgagggaatcaacgatatcaaggat
ctatatgaaggcatgaagttgcccggaatcgtgaccaatgttacaaaattcggcgcgttt
gtggatattggcgtgcaccgtgacggccttgttcacataagccaactggccgacaaattc
atacgagatccatcagaagtggttgctgcaggccgtgaggtcactgtcactgtcatcggc
gttgacgaaaaacgcgggcgtataaatctgagtatgaaaacgcacacagaggcttaa
DBGET
integrated database retrieval system
