Pseudodesulfovibrio nedwellii: SYK_09690
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Entry
SYK_09690 CDS
T09024
Name
(GenBank) membrane-bound lytic murein transglycosylase C
KO
K08306
peptidoglycan lytic transglycosylase C [EC:
4.2.2.29
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pnw01011
]
SYK_09690
Enzymes [BR:
pnw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
SYK_09690
Peptidoglycan biosynthesis and degradation proteins [BR:
pnw01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
SYK_09690
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mltc_N
SLT
SLT_4
MP31
Phage_lysozyme2
Motif
Other DBs
NCBI-ProteinID:
BDQ36609
UniProt:
A0ABM8AYK7
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All DBs
Position
1022435..1023655
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AA seq
406 aa
AA seq
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MWCGSINSELYHVKFYTLYNDMTRPFILFLCLAIIAGCTRYDAMRIARAAATGNPATAAE
SLARDKAIGYATNPASIASDIKQFQKIVDDFIYVVTSVWGKDDVRTPRPKEYVKYTQNYL
SRASVDFDTGMITVETVDTDNPQMSLHNAIVTTLLTPNDPRAVDLYSAKTVKLGDTPFLL
GEVKDNDTKNIRWEWRASRYADVLMGTCLKKRTSEGKIINYVTIPMVKDHLNIRANKYKK
QVVSAAKRFDISQNLIYAIMKVESDFNPFAISSAMAIGLMQVVPATAGSDVYHYLNGKNG
QPSKQDLLVASTNITYGSAYLHLLGTRFLKDITNPTSREYCIIAGYNGGAGTVLRTFDKD
RKNAAQTINRLSPGKVYTTLRTETPYAETRRYLGKVLEAKKQFVNF
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
ttgtggtgcgggagtattaacagtgaattataccatgtcaaattttatactctttacaac
gatatgacacgaccttttattctctttctctgtctggcaatcatagccggatgtacacga
tatgatgccatgcgcattgcccgcgctgcggccactggcaatcctgcaactgcagccgaa
agtctggcacgagacaaagccatcgggtacgccacgaatcccgcatctatcgcttctgat
attaaacaatttcaaaaaatcgtcgatgattttatttatgtagttacttcggtctgggga
aaagatgatgtacgaacaccccgtcccaaagaatacgtcaaatacactcaaaactatctc
tcacgcgccagtgttgattttgataccggcatgatcaccgtagagacagtggatacagac
aaccctcaaatgagcctacataacgccattgtcaccacccttctcaccccaaacgaccct
cgagcagtagatctgtattcagccaaaacagtcaaactgggagatactccgtttctgctg
ggagaagtcaaagataatgataccaagaatattcgatgggaatggcgtgccagccgctat
gccgacgtgctcatgggaacctgtctaaaaaaacgaaccagtgaaggtaaaatcattaat
tacgtaaccattccaatggtcaaagatcatctaaatattcgagccaacaaatacaaaaaa
caggttgtctccgcagccaagcgattcgacataagccaaaatctcatctatgcgatcatg
aaagtggaatctgatttcaatccatttgcaatcagttcagccatggctatcggattgatg
caggtcgtaccggctacggcaggaagcgacgtataccactatctgaacggcaaaaatggt
caaccttcgaaacaggacttgctggttgcctctaccaacattacgtacggctccgcctat
ctccacttgctaggaacacgcttcctcaaagacataacaaatccgacctcacgagaatac
tgcataatcgccggatacaacggcggcgcggggacagtactcagaacctttgacaaagac
aggaaaaacgcggcacaaaccatcaacaggctgtcacccggaaaagtatacaccaccctc
cgaacagagacaccctatgcggaaacacgccgttaccttggcaaagtacttgaagccaag
aaacaattcgtcaacttctag
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