Pseudodesulfovibrio nedwellii: SYK_10350
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Entry
SYK_10350 CDS
T09024
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00730
Thiamine metabolism
pnw01100
Metabolic pathways
pnw01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SYK_10350 (thiC)
Enzymes [BR:
pnw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
SYK_10350 (thiC)
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
Motif
Other DBs
NCBI-ProteinID:
BDQ36675
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Position
complement(1087347..1088657)
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AA seq
436 aa
AA seq
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MAASYTTQMDAARKGIVTPQMETVARKENIRIEDLMERMARGTVIIPANKNHTSLDAEAV
GEGMRIKINVNLGISKDCSDVDPELDKVQAALDLKAEAIMDLSCYGKTQEFRQKLVKMSP
AMVGTVPIYDAVGFYDKNLQDITVDEFFDVVQRHVEDGVDFLTIHCGLNKHTAEKVKDAK
RLTNIVSRGGSLLFTWMEINNAENPFYEHFDRLLDICEEYDVTLSLGDGCRPGCLHDATD
ACQVEELITLGELTKRAWERNVQVMIEGPGHMAMGEIAGNMMMEKRLCHGAPFYVLGPIV
TDVAPGYDHITSAIGGAIAGMSGADFLCYVTPAEHLRLPTMEDMKEGIIATRIAAHAADI
AKGYPGASDWDDKMSKARAALDWEAMFNIAMDPVRPREFRESSKPEHEDSCSMCGKMCAV
RNMNRVLEGKDIQLDD
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatcatacaccactcagatggacgcggctcgtaaaggcatcgtcaccccccag
atggaaaccgtggctcgtaaggaaaatatccgtatcgaggacctcatggagcgtatggcc
aggggaaccgttattatcccggccaataagaatcataccagcctggatgccgaagccgtt
ggcgaaggcatgcgtatcaagatcaacgttaacttgggcatttccaaggattgcagcgat
gtagatcctgaattggacaaggtccaggctgcgttggacctcaaggccgaggccattatg
gatctgtcttgctatggcaagacccaggagtttcgtcagaaattggtgaaaatgtctccg
gcaatggtcggtaccgtacccatttatgatgctgtaggattctatgacaagaatttgcag
gatataactgtggacgagttttttgatgttgtgcaacgtcatgttgaagacggtgtggac
tttctgaccattcactgcggtttgaacaagcatactgcagaaaaggtcaaggatgccaaa
cgactgactaatattgtttcacgcggtggttccttactctttacgtggatggaaattaat
aatgcagagaatccgttctacgagcattttgaccgtctgctcgacatttgtgaagagtat
gatgttaccttgagccttggtgatggttgtcgtcccggttgtctgcatgacgccactgac
gcttgtcaggtggaagagctcattactttgggcgagctgaccaagcgtgcttgggagcgt
aatgttcaggttatgatcgaaggccctggtcacatggccatgggtgagattgccggcaat
atgatgatggaaaaaaggctgtgccacggtgcaccgttttacgtgctcggtcctatcgtg
acagatgtggctcccggttacgatcatattacttctgctattggtggtgctatcgcgggt
atgtccggtgcggattttctgtgttatgtcactccggcggagcatctgcgtctgcctact
atggaagatatgaaagagggcatcatcgctacccgtatcgctgctcacgctgctgatatc
gccaagggataccctggtgcaagtgactgggatgacaaaatgtccaaggcccgtgccgct
ctcgattgggaagccatgttcaacatcgccatggacccggttcgtcctcgtgagttccgt
gagtcatccaagccggagcatgaggactcctgctccatgtgcggtaaaatgtgcgcagtg
cgcaacatgaatcgtgtgttggaaggcaaggacatccaactggatgactag
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