Pseudodesulfovibrio nedwellii: SYK_10890
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Entry
SYK_10890 CDS
T09024
Name
(GenBank) ABC transporter
KO
K16784
biotin transport system ATP-binding protein [EC:7.6.2.-]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SYK_10890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnw02000
]
SYK_10890
Transporters [BR:
pnw02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Biotin transporter
SYK_10890
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_22
ABC_ATPase
SMC_N
AAA_25
AAA_23
MeaB
AAA_16
nSTAND1
AAA_30
URGCP_GTPase
nSTAND_NTPase5
AAA_15
Motif
Other DBs
NCBI-ProteinID:
BDQ36729
UniProt:
A0ABN6S0J9
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All DBs
Position
complement(1143233..1143973)
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AA seq
246 aa
AA seq
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MITLNALSFAYPSGGNVLSGLSMNIPKGTLLGVVGANGSGKSTLLSLMAGLYAPTGGSLI
VADRVSPGSEKSIRAICRLVMQDADLQILGGTVEEDLLMGARRDEKAIAQAKYMADRFNL
LSAWECPVQTLSWGMKRKLCLAAALLDDPNVLLLDEPFSGLDYPGVREMRSLIGENRQAG
LTQVVSSHDLESFIDLVDGLAVLDSGKLVVTGPPESVLDSVREHGVRPPHSWAVDRVIGS
WDTGNN
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgattacattgaacgcactctcttttgcctatccatccggtgggaatgtcctgtccggt
ctttccatgaatattcccaaaggtactcttttgggggtggttggtgctaatggaagcggg
aagtcaacgcttctatcacttatggccggattatatgccccgactggaggttcattgatc
gttgccgatcgtgtcagccccggttcggagaaatccattcgcgccatatgtcgtttggtc
atgcaggatgccgatctgcaaattcttggcgggactgtggaagaagatctgctcatggga
gctaggcgcgatgaaaaagccattgctcaggccaagtatatggccgacaggttcaatttg
ctttcggcatgggagtgccctgtgcagactctttcctgggggatgaagcgcaagctttgt
ctggctgcggcattgttggatgatccgaatgttttactgctggatgaacccttcagcggg
ctggattatccaggagtacgcgagatgcgttctcttattggtgaaaatcgtcaagccggg
ttgacacaggtcgtgtcttctcatgatctggaaagtttcattgatctggtggatgggttg
gctgttcttgatagtggaaagctcgttgtgaccggtccgcctgaatccgtactggattct
gttcgggagcatggcgttcgacctccgcactcctgggctgttgatcgagttattgggtca
tgggacacggggaacaattga
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