Pseudodesulfovibrio nedwellii: SYK_10930
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Entry
SYK_10930 CDS
T09024
Name
(GenBank) ATP-dependent DNA ligase
KO
K10094
nickel transport protein
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SYK_10930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnw02000
]
SYK_10930
Transporters [BR:
pnw02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Nickel transporter
SYK_10930
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4198
DUF6795
Motif
Other DBs
NCBI-ProteinID:
BDQ36733
LinkDB
All DBs
Position
complement(1146061..1146783)
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AA seq
240 aa
AA seq
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MALVCVFWATTVSAHFGMLIPDTDETTQQKRDVELTLSFSHPFELQGMELEKPAEFFVVI
DDGKRMDLLSTLKETRVMDHTGWKTSYTPKRPGMYSFVFDPVPYKEDAENNYIRHITKVV
VDGFGEGEEWNKPLGLETEIVPLTRPFGNYAGNVFQGIIMYKGKPAPFTRVEVEFYNKDG
KRTAPNERMVTQEVLADSNGVFTFACPWQGWWGFAGLTTADEPYKGRELELGAVIWVEMK
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
ttggcattggtctgcgttttttgggcgacaaccgtttccgctcattttggtatgttgatt
cctgatacggatgagacaactcagcaaaaacgtgatgtggagttgaccttgtctttttcc
catccatttgaactgcagggtatggagctggagaagccagctgaattttttgtggtcata
gatgacggtaagcgtatggatcttctgtctacgctgaaggaaacccgcgttatggaccat
acgggttggaaaacctcctacacacccaagcgccctggaatgtactcattcgtttttgat
ccagttccgtacaaggaagacgctgagaacaactatattcgtcatatcaccaaggttgtg
gtcgatggttttggtgaaggagaggaatggaacaagcctttaggtttggagactgaaatc
gttcctttgacgcgtccttttggcaactatgccggaaatgttttccaaggcattattatg
tataagggtaaacctgcaccgtttactcgtgtcgaagttgaattttataataaagatggc
aaacgtaccgcaccgaacgagcgtatggtgacgcaggaagtccttgctgattccaatggc
gtttttacttttgcctgtccgtggcaaggctggtggggttttgctggtttgacgactgct
gacgaaccgtacaaaggtcgtgagcttgaactcggcgcagtgatctgggtcgaaatgaag
taa
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